RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GABRG1Q8N1C3 465 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 MNS1Q8NEH6 495 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 TACO1Q9BSH4 297 aaKnown RBP14.56□□□□□ -0.08
LIG1-205ENST00000593425 TXLNGYQ9BZA5 131 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 TUBB1Q9H4B7 451 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 HHATLQ9HCP6 504 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 UBQLN4Q9NRR5 601 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
LIG1-205ENST00000593425 OXSMQ9NWU1 459 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 BAIAP2L1Q9UHR4 511 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 FIS1Q9Y3D6 152 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 RNF115Q9Y4L5 304 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 JMJD1CQ15652 2540 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 CSPG4Q6UVK1 2322 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 TLN2Q9Y4G6 2542 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 NPIPA5A0A0B4J1W7 369 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 NPIPA7E9PJI5 369 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 OVOL3O00110 214 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 SLC28A1O00337 649 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 CLOCKO15516 846 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 NPIPA8P0DM63 369 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 HPGDP15428 266 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 CDKN1AP38936 164 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 TAB1Q15750 504 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 RFTN2Q52LD8 501 aaPredicted RBP14.55□□□□□ -0.08
LIG1-205ENST00000593425 NCMAPQ5T1S8 102 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 SEZ6L2Q6UXD5 910 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 MISPQ8IVT2 679 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 TUSC5Q8IXB3 177 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 ZNF619Q8N2I2 560 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 STEAP2Q8NFT2 490 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 JADE3Q92613 823 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 FBXW5Q969U6 566 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 FAM120BQ96EK7 910 aaKnown RBP14.55□□□□□ -0.08
LIG1-205ENST00000593425 COQ10BQ9H8M1 238 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 ACSS1Q9NUB1 689 aaPredicted RBP14.55□□□□□ -0.08
LIG1-205ENST00000593425 KLHL13Q9P2N7 655 aa14.55□□□□□ -0.08
LIG1-205ENST00000593425 RGS14O43566 566 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 DANCRP0C864 163 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 ELK4P28324 431 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 LCN1P31025 176 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 SERPINB4P48594 390 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 POU6F2P78424 691 aaPredicted RBP14.54□□□□□ -0.08
LIG1-205ENST00000593425 DMTNQ08495 405 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 CCDC153Q494R4 210 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 TMEM201Q5SNT2 666 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 SFRP5Q5T4F7 317 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 GTF2IRD2BQ6EKJ0 949 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 ZCCHC12Q6PEW1 402 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 CBLN3Q6UW01 205 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 GTF2IRD2Q86UP8 949 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 KBTBD8Q8NFY9 601 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 SPATA3Q8NHX4 192 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 PHOSPHO1Q8TCT1 267 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 CDS1Q92903 461 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 CPNE4Q96A23 557 aaPredicted RBP14.54□□□□□ -0.08
LIG1-205ENST00000593425 BTBD2Q9BX70 525 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 IQCGQ9H095 443 aaKnown RBP14.54□□□□□ -0.08
LIG1-205ENST00000593425 ZCCHC3Q9NUD5 404 aaKnown RBP14.54□□□□□ -0.08
LIG1-205ENST00000593425 GIN1Q9NXP7 522 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 MAGED1Q9Y5V3 778 aaPredicted RBP14.54□□□□□ -0.08
LIG1-205ENST00000593425 FREM1Q5H8C1 2179 aa14.54□□□□□ -0.08
LIG1-205ENST00000593425 FBN3Q75N90 2809 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 AZIN1O14977 448 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 LSM1O15116 133 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 HMGN2P05204 90 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 CD3EP07766 207 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 LINC00032P0C843 101 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 PABPC4LP0CB38 370 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 IL32P24001 234 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 EIF1P41567 113 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 RNPS1Q15287 305 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 NDUFAF6Q330K2 333 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 LIPMQ5VYY2 423 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 FCRLAQ7L513 359 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 GSPT2Q8IYD1 628 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 BANPQ8N9N5 519 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 CCDC63Q8NA47 563 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 ZNF524Q96C55 264 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 CHMP6Q96FZ7 201 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 REXO5Q96IC2 774 aaKnown RBP14.53□□□□□ -0.08
LIG1-205ENST00000593425 HDHD5Q9BXW7 423 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 REG4Q9BYZ8 158 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 ICAM5Q9UMF0 924 aa14.53□□□□□ -0.08
LIG1-205ENST00000593425 IGHV3-15A0A0B4J1V0 119 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ZNF195O14628 629 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 NUDT14O95848 222 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ADAP00813 363 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 SHBGP04278 402 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 NEFHP12036 1026 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 CPA3P15088 417 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ADH6P28332 368 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 CRHR1P34998 444 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 ACVR1BP36896 505 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 P2RX1P51575 399 aa14.52□□□□□ -0.09
LIG1-205ENST00000593425 TMEM176BQ3YBM2 270 aaPredicted RBP14.52□□□□□ -0.09
LIG1-205ENST00000593425 GALNTL6Q49A17 601 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms