RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MRPL2Q5T653 305 aaKnown RBP8.79□□□□□ -1
DDX39A-220ENST00000593008 ZNF324BQ6AW86 544 aaPredicted RBP8.79□□□□□ -1
DDX39A-220ENST00000593008 GLYATQ6IB77 296 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SLC25A25Q6KCM7 469 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 NUP54Q7Z3B4 507 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SULF2Q8IWU5 870 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SLC15A4Q8N697 577 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 WDSUB1Q8N9V3 476 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 ST6GALNAC3Q8NDV1 305 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 VANGL1Q8TAA9 524 aaPredicted RBP8.79□□□□□ -1
DDX39A-220ENST00000593008 NR4A3Q92570 626 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 FAM162AQ96A26 154 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 MCUR1Q96AQ8 359 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 DTNBP1Q96EV8 351 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SCMH1Q96GD3 660 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 JSRP1Q96MG2 331 aaPredicted RBP8.79□□□□□ -1
DDX39A-220ENST00000593008 G6PC3Q9BUM1 346 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 HHATLQ9HCP6 504 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 DNAJB12Q9NXW2 375 aaKnown RBP8.79□□□□□ -1
DDX39A-220ENST00000593008 POMPQ9Y244 141 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 CARD8Q9Y2G2 431 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 SNX13Q9Y5W8 968 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 MAST4O15021 2626 aa8.79□□□□□ -1
DDX39A-220ENST00000593008 NCKAP5O14513 1909 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 A0A0G2JPF8 293 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HNRNPCL2B2RXH8 293 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HNRNPCL3B7ZW38 293 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 ALG1L2C9J202 215 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 NPIPA5E9PKD4 350 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 SCDO00767 359 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 PEX1O43933 1283 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HS6ST1O60243 411 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CDC40O60508 579 aaKnown RBP eCLIP8.78□□□□□ -1
DDX39A-220ENST00000593008 TPST2O60704 377 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HNRNPCL1O60812 293 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 ATP5HO75947 161 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CRYABP02511 175 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 HNRNPCL4P0DMR1 293 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 NAGAP17050 411 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 PTNP21246 168 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HTR2AP28223 471 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 KDELR2P33947 212 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 MAGEA8P43361 318 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 OR1E2P47887 323 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TMED10P49755 219 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 MEOX1P50221 254 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CCR4P51679 360 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TDGF1P3P51864 188 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 FOXO1Q12778 655 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 SKP2Q13309 424 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CCNIQ14094 377 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 FGFBP1Q14512 234 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 ZNF311Q5JNZ3 666 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 ERICH5Q6P6B1 374 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 GFRALQ6UXV0 394 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CCDC80Q76M96 950 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TSEN54Q7Z6J9 526 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 ARMC8Q8IUR7 673 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 DND1Q8IYX4 353 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 TMCO5AQ8N6Q1 288 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TMEM178AQ8NBL3 297 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 BHLHE22Q8NFJ8 381 aaPredicted RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 OR2M7Q8NG81 312 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 OR5M1Q8NGP8 315 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 PHOSPHO1Q8TCT1 267 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 NTNG2Q96CW9 530 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TPD52L3Q96J77 140 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 HSH2DQ96JZ2 352 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 DOHHQ9BU89 302 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 SPATA9Q9BWV2 254 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 ANGPTL4Q9BY76 406 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 TBL1XR1Q9BZK7 514 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 CTPS2Q9NRF8 586 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 UBQLN4Q9NRR5 601 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 SACM1LQ9NTJ5 587 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 MED11Q9P086 117 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 SUCOQ9UBS9 1254 aaKnown RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 ERRFI1Q9UJM3 462 aaPredicted RBP8.78□□□□□ -1
DDX39A-220ENST00000593008 NPIPA1Q9UND3 350 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 DTNAQ9Y4J8 743 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 PCDHGB3Q9Y5G1 929 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 WIF1Q9Y5W5 379 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 LIPGQ9Y5X9 500 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 PTPN13Q12923 2485 aa8.78□□□□□ -1
DDX39A-220ENST00000593008 ESPL1Q14674 2120 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TMEM247A6NEH6 219 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TP53I11O14683 189 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 SNPHO15079 494 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 HCRTR2O43614 444 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 TRIM3O75382 744 aaPredicted RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 PRKD3O94806 890 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 P04436 131 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 DBIP07108 87 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 UBL4AP11441 157 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 ETS2P15036 469 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 NQO1P15559 274 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 RYKP34925 604 aa8.77□□□□□ -1.01
DDX39A-220ENST00000593008 YAP1P46937 504 aaKnown RBP8.77□□□□□ -1.01
DDX39A-220ENST00000593008 KCNJ5P48544 419 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms