RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 SLC35A4Q96G79 324 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 ADOQ96SZ5 270 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 CCL19Q99731 98 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 GSTO2Q9H4Y5 243 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 PTGES2Q9H7Z7 377 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 SAR1AQ9NR31 198 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 FARSBQ9NSD9 589 aaKnown RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 TAS2R9Q9NYW1 312 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 CLCF1Q9UBD9 225 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 MRTO4Q9UKD2 239 aaKnown RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 UTS2RQ9UKP6 389 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 CES1P1Q9UKY3 287 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 GPR55Q9Y2T6 319 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 OR10H1Q9Y4A9 318 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 TESMINQ9Y4I5 508 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 C16orf97H3BN30 126 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 HCRTR2O43614 444 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 TMCC2O75069 709 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 CBX7O95931 251 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 FCGR2AP12318 317 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 POU2F1P14859 743 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 IDO1P14902 403 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 PPP3CBP16298 524 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF708P17019 499 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 DPP4P27487 766 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 MPIP34949 423 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 RPL3P39023 403 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 PTGDSP41222 190 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 STARP49675 285 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 EMDP50402 254 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 PSMD4P55036 377 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 LRRC74AQ0VAA2 488 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 MGAT2Q10469 447 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 CSTF3Q12996 717 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ACKR1Q16570 336 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ZSCAN26Q16670 478 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 IMPG1Q17R60 797 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 TRMT12Q53H54 448 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 KANK2Q63ZY3 851 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ZCCHC23Q6ZST2 131 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 Q71RC1 249 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 LARP4Q71RC2 724 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 TRPM8Q7Z2W7 1104 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 CXorf67Q86X51 503 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ARHGAP24Q8N264 748 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 OR4F6Q8NGB9 312 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF675Q8TD23 568 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 TSPEARQ8WU66 669 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 GFM2Q969S9 779 aaKnown RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 TM4SF18Q96CE8 201 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF845Q96IR2 970 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-226ENST00000591534 DHRS1Q96LJ7 313 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 BTBD9Q96Q07 612 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 HBEGFQ99075 208 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 MEAF6Q9HAF1 191 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 SLCO1B3Q9NPD5 702 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 EHD3Q9NZN3 535 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 PPP4R1LQ9P1A2 415 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 DTX4Q9Y2E6 619 aa8.52□□□□□ -1.05
BRCA1-226ENST00000591534 NCKAP5O14513 1909 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 AKAP6Q13023 2319 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 GNG14A0A1W2PPG7 69 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 EMC8O43402 210 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 COQ9O75208 318 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 TNFSF13O75888 250 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 OR4F21O95013 312 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 PDYNP01213 254 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 LBPP18428 481 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 CRYGSP22914 178 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 PRDX6P30041 224 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ATP4BP51164 291 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 CLDN18P56856 261 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ZNHIT3Q15649 155 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-226ENST00000591534 SPIN4Q56A73 249 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 RAET1LQ5VY80 246 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 FAM91A1Q658Y4 838 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 OGFOD2Q6N063 350 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 EPGNQ6UW88 154 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 BEND4Q6ZU67 534 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF771Q7L3S4 317 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-226ENST00000591534 DDIASQ8IXT1 998 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 C10orf67Q8IYJ2 551 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 C1orf52Q8N6N3 182 aaKnown RBP8.51□□□□□ -1.05
BRCA1-226ENST00000591534 NATD1Q8N6N6 113 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF781Q8N8C0 355 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 STARD4Q96DR4 205 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ARSGQ96EG1 525 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 PIK3IP1Q96FE7 263 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 COX4I2Q96KJ9 171 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 Q96MF0 132 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 WFIKKN1Q96NZ8 548 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 SORT1Q99523 831 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 SMR3AQ99954 134 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms