RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SNX6Q9UNH7 406 aa2.57□□□□□ -2
SMAD4-207ENST00000589076 MRPS7Q9Y2R9 242 aaKnown RBP2.57□□□□□ -2
SMAD4-207ENST00000589076 WDR45Q9Y484 360 aa2.57□□□□□ -2
SMAD4-207ENST00000589076 BAHCC1Q9P281 2608 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 IGLV8-61A0A075B6I0 122 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 B4DXG7 233 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 NPIPA7E9PJI5 369 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 XPO1O14980 1071 aaKnown RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 ZSCAN12O43309 604 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 BCAS1O75363 584 aaPredicted RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 SCRG1O75711 98 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 NPIPA8P0DM63 369 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 SERPINA2P20848 420 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 HNRNPA2B1P22626 353 aaKnown RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 PTBP1P26599 531 aaKnown RBP eCLIP2.56□□□□□ -23e-11■■■■□ 21.8
SMAD4-207ENST00000589076 IL2RGP31785 369 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 EFNA3P52797 238 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 PLA2G16P53816 162 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 HSD17B7P56937 341 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 MRPS11P82912 194 aaKnown RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 PJVKQ0ZLH3 352 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 TMEM52BQ4KMG9 183 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 OR5M10Q6IEU7 315 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 GALNT17Q6IS24 598 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 CES3Q6UWW8 571 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 APOBEC3FQ8IUX4 373 aaKnown RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 ZBED8Q8IZ13 594 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 ARL6IP6Q8N6S5 226 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 ZNF525Q8N782 197 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 ZNF540Q8NDQ6 660 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 RLN3Q8WXF3 142 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 OSTF1Q92882 214 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 SERAC1Q96JX3 654 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 OR5B2Q96R09 309 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 SLC6A7Q99884 636 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 CITED1Q99966 193 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 OMDQ99983 421 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 ALG12Q9BV10 488 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 RAB33BQ9H082 229 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 TMEM117Q9H0C3 514 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 IKZF5Q9H5V7 419 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 RMND5AQ9H871 391 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 AATFQ9NY61 560 aaKnown RBP eCLIP2.56□□□□□ -2
SMAD4-207ENST00000589076 WRAP73Q9P2S5 460 aaPredicted RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 CHRNA9Q9UGM1 479 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 APOBEC3BQ9UH17 382 aaKnown RBP2.56□□□□□ -2
SMAD4-207ENST00000589076 NPIPA1Q9UND3 350 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 LRRK1Q38SD2 2015 aa2.56□□□□□ -2
SMAD4-207ENST00000589076 TRANK1O15050 2925 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 DHRS7CA6NNS2 312 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 K7ENP7 123 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 MAGEB3O15480 346 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 LATO43561 262 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 EFNA2O43921 213 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 UGT2B17O75795 530 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 NEBLO76041 1014 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 RHOBTB1O94844 696 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KIAA0754O94854 1291 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KRTAP1-4P0C5Y4 121 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 RPA2P15927 270 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 GCFC2P16383 781 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 ZP3P21754 424 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 CALRP27797 417 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 CA8P35219 290 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KDRP35968 1356 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 RPL29P47914 159 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 PPT1P50897 306 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 P2RY4P51582 365 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 AP3M2P53677 418 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 OTUD4Q01804 1114 aaKnown RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 ST3GAL3Q11203 375 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 LAGE3Q14657 143 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 MESDQ14696 234 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 FRMPD4Q14CM0 1322 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KIAA0040Q15053 153 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 PRR4Q16378 134 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 SYPL1Q16563 259 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 ANKDD1AQ495B1 522 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 PAGE2BQ5JRK9 111 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 RSBN1Q5VWQ0 802 aaPredicted RBP2.55□□□□□ -2
SMAD4-207ENST00000589076 ACSM5Q6NUN0 579 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 FAM71F2Q6NXP2 309 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 SYT10Q6XYQ8 523 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 ACOT1Q86TX2 421 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 CLDN19Q8N6F1 224 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 CD177Q8N6Q3 437 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 DENND6BQ8NEG7 585 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 OR2T33Q8NG76 320 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 OR10A7Q8NGE5 316 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 OR13F1Q8NGS4 319 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 ARNTL2Q8WYA1 636 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 FAF2Q96CS3 445 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 VSIG2Q96IQ7 327 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 C7orf34Q96L11 122 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 SENP8Q96LD8 212 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 KIR2DL4Q99706 377 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 ERP44Q9BS26 406 aa2.55□□□□□ -2
SMAD4-207ENST00000589076 C19orf24Q9BVV8 132 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms