RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 RIMKLAQ8IXN7 391 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 KIRREL3Q8IZU9 778 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 OR6K3Q8NGY3 331 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 OR2V1Q8NHB1 315 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 PLSCR4Q9NRQ2 329 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 GPATCH2Q9NW75 528 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 ASIC5Q9NY37 505 aa15.22■□□□□ 0.03
TRIM47-203ENST00000586495 NUP214P35658 2090 aaPredicted RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 WDR91A4D1P6 747 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 DUXAA6NLW8 204 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 GTPBP1O00178 669 aaKnown RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 TNFSF11O14788 317 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 BIRC5O15392 142 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 NUDT14O95848 222 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 LINGO3P0C6S8 592 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 MYZAPP0CAP1 466 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 IL11P20809 199 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 CRYGSP22914 178 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 ELK4P28324 431 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 ADH6P28332 368 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 SOAT1P35610 550 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 SLC6A8P48029 635 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 ATP12AP54707 1039 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 SUMO3P55854 103 aaPredicted RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 ABCE1P61221 599 aaKnown RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 ZNF117Q03924 483 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 CTU2Q2VPK5 515 aaKnown RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 PGS1Q32NB8 556 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 KLHL26Q53HC5 615 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 POC1BQ8TC44 478 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 OSTF1Q92882 214 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 PKNOX2Q96KN3 472 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 NPAS1Q99742 590 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 SSU72Q9NP77 194 aaKnown RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 TIGARQ9NQ88 270 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 BEX4Q9NWD9 120 aaPredicted RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 C6orf203Q9P0P8 240 aaPredicted RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 PCDHGB4Q9UN71 923 aa15.21■□□□□ 0.03
TRIM47-203ENST00000586495 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.21■□□□□ 0.03
TRIM47-203ENST00000586495 A0A0J9YW62 118 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 A0A1W2PPR1 153 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 GJE1A6NN92 205 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 TM9SF1O15321 606 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 ITM2AO43736 263 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 SS18L1O75177 396 aaPredicted RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 AK1P00568 194 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 OPN1LWP04000 364 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 PABPC4LP0CB38 370 aaKnown RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 CD53P19397 219 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 CARD18P57730 90 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 HBA1P69905 142 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 ADAM8P78325 824 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 FOXD4Q12950 439 aaPredicted RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 PDCD2Q16342 344 aaPredicted RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 EXOC3L2Q2M3D2 409 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 LILRA2Q8N149 483 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 ZNF614Q8N883 585 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 OR5AK3PQ8NH89 298 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 NUDT8Q8WV74 236 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 PIK3IP1Q96FE7 263 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 REXO5Q96IC2 774 aaKnown RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 KLHL15Q96M94 604 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 OR7D2Q96RA2 312 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 KLHL4Q9C0H6 718 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 TMEM185BQ9H7F4 350 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 CLEC4AQ9UMR7 237 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 CARD8Q9Y2G2 431 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 RAP2CQ9Y3L5 183 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 DTNAQ9Y4J8 743 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 ACTL7BQ9Y614 415 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 GPC6Q9Y625 555 aaPredicted RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 KCNE3Q9Y6H6 103 aa15.2■□□□□ 0.02
TRIM47-203ENST00000586495 V9GYY5 206 aaPredicted RBP15.2■□□□□ 0.02
TRIM47-203ENST00000586495 ITPR3Q14573 2671 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 NPIPA5A0A0B4J1W7 369 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 DEFB108AA8MXU0 73 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 NPIPA7E9PJI5 369 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 RNASET2O00584 256 aaKnown RBP15.19■□□□□ 0.02
TRIM47-203ENST00000586495 EIF4E2O60573 245 aaKnown RBP15.19■□□□□ 0.02
TRIM47-203ENST00000586495 NPIPA8P0DM63 369 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 FOSL1P15407 271 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 PPP3CBP16298 524 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 MATN1P21941 496 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 CCKARP32238 428 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 ZNF844Q08AG5 666 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 FOXF1Q12946 379 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 CBLN3Q6UW01 205 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 BEND4Q6ZU67 534 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 ZNF550Q7Z398 422 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 STK32CQ86UX6 486 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 ZNF781Q8N8C0 355 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 VPS37AQ8NEZ2 397 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 CPNE4Q96A23 557 aaPredicted RBP15.19■□□□□ 0.02
TRIM47-203ENST00000586495 ZC3HAV1LQ96H79 300 aaKnown RBP15.19■□□□□ 0.02
TRIM47-203ENST00000586495 PPP1R36Q96LQ0 422 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 SDF2Q99470 211 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 PARD6BQ9BYG5 372 aa15.19■□□□□ 0.02
TRIM47-203ENST00000586495 DPY30Q9C005 99 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms