RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PPP1R8Q12972 351 aaKnown RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 TARDBPQ13148 414 aaKnown RBP eCLIP5.7□□□□□ -1.5
LIG3-206ENST00000586058 TOP3AQ13472 1001 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 PIN1Q13526 163 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 KEAP1Q14145 624 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 MAPK11Q15759 364 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ZIK1Q3SY52 487 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 ELOA3BQ3SY89 546 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ALG10BQ5I7T1 473 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 KDM4DQ6B0I6 523 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PLAG1Q6DJT9 500 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ULK3Q6PHR2 472 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 CASP12Q6UXS9 341 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ZNF517Q6ZMY9 492 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 OLIG3Q7RTU3 272 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 GALNT5Q7Z7M9 940 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ZNF605Q86T29 641 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 P3H2Q8IVL5 708 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 RNF113BQ8IZP6 322 aaKnown RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 CADM2Q8N3J6 435 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 MARVELD2Q8N4S9 558 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 TMEM156Q8N614 296 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 AQP11Q8NBQ7 271 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 CLEC1AQ8NC01 280 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 APCDD1LQ8NCL9 501 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ELOA3Q8NG57 546 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 OR4N2Q8NGD1 307 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 OR4K5Q8NGD3 323 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 GNPDA2Q8TDQ7 276 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 GRHL3Q8TE85 626 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 THAP3Q8WTV1 239 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 DNAJA4Q8WW22 397 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 ACOT11Q8WXI4 607 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 TMEM234Q8WY98 164 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PMEPA1Q969W9 287 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ADIPOR1Q96A54 375 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 C8orf44Q96CB5 159 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 NXPE2Q96DL1 559 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PLEKHA8Q96JA3 519 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 FER1L6-AS2Q96M78 137 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 SLC29A1Q99808 456 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 UCK2Q9BZX2 261 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ZNF700Q9H0M5 742 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 TOR3AQ9H497 397 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 GPN2Q9H9Y4 310 aaPredicted RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 NTN4Q9HB63 628 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ZNF160Q9HCG1 818 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 MMP25Q9NPA2 562 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ATP13A2Q9NQ11 1180 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 EXOSC3Q9NQT5 275 aaKnown RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 CTPS2Q9NRF8 586 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PPP4R1LQ9P1A2 415 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 ACAD8Q9UKU7 415 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 SLC7A7Q9UM01 511 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PPIEQ9UNP9 301 aaKnown RBP5.7□□□□□ -1.5
LIG3-206ENST00000586058 MYRFQ9Y2G1 1151 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 MED31Q9Y3C7 131 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 AK5Q9Y6K8 562 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 PCSK5Q92824 1860 aa5.7□□□□□ -1.5
LIG3-206ENST00000586058 BDP1A6H8Y1 2624 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 LOC100130705A0A1B0GUX0 176 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SH3PXD2BA1X283 911 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HTR3EA5X5Y0 456 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SNTNA6NMZ2 147 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 WWP2O00308 870 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HCRTR2O43614 444 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SCO2O43819 266 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 CDC40O60508 579 aaKnown RBP eCLIP5.69□□□□□ -1.5
LIG3-206ENST00000586058 ICOSLGO75144 302 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ANGPTL1O95841 491 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 GKN3PP0CG01 181 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SAGP10523 405 aaPredicted RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 PNMTP11086 282 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 LIPCP11150 499 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 COX6A1P12074 109 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 GP1BBP13224 206 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SNRPBP14678 240 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 BMP7P18075 431 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 MYF6P23409 242 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 EEF1B2P24534 225 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 GTF2E2P29084 291 aaKnown RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 EVI2BP34910 448 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 RYKP34925 604 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 ADH7P40394 386 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HTR3AP46098 478 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 P2RX1P51575 399 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 HMGA2P52926 109 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SUMO3P55854 103 aaPredicted RBP5.69□□□□□ -1.5
LIG3-206ENST00000586058 C17orf67Q0P5P2 114 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 COX10Q12887 443 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 NPRL3Q12980 569 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 KCNAB2Q13303 367 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 PUM1Q14671 1186 aaKnown RBP eCLIP5.69□□□□□ -1.5
LIG3-206ENST00000586058 PCOLCEQ15113 449 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 OR1Q1Q15612 314 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 NPTX1Q15818 432 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 SLC36A3Q495N2 470 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 WBP2NLQ6ICG8 309 aa5.69□□□□□ -1.5
LIG3-206ENST00000586058 TCTN3Q6NUS6 607 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms