RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PSMG1O95456 288 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 EDNRAP25101 427 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 APEX1P27695 318 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 ELK4P28324 431 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 SHC1P29353 583 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 C2orf54Q08AI8 447 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 CARTPTQ16568 116 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 PSD2Q9BQI7 771 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 FKRPQ9H9S5 495 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 Q9N2J8 555 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 PFDN4Q9NQP4 134 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 GRHL1Q9NZI5 618 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 KLHL9Q9P2J3 617 aa12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 MRTO4Q9UKD2 239 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-219ENST00000581660 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 RAD51CO43502 376 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 NDUFB5O43674 189 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 LILRA1O75019 489 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 NGFRP08138 427 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 ALDH18A1P54886 795 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 SH2D4BQ5SQS7 431 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 FAM9CQ8IZT9 166 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 PLD6Q8N2A8 252 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 COQ10BQ9H8M1 238 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 PCDHB10Q9UN67 800 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 PCDHGB1Q9Y5G3 927 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
CSNK1D-219ENST00000581660 A0A087WV62 115 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 CCDC189A1A4V9 331 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 OR7A17O14581 309 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 STAMBPO95630 424 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 LINGO3P0C6S8 592 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 ENPP1P22413 925 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SFTPDP35247 375 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 EIF1P41567 113 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SNRPD2P62316 118 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SLC18A2Q05940 514 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 C3orf62Q6ZUJ4 267 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 CPNE1Q99829 537 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SENP1Q9P0U3 644 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 NTMQ9P121 344 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-219ENST00000581660 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 GJE1A6NN92 205 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 M0R1B8 84 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 EFNA2O43921 213 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 RAD51DO75771 328 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 SLITRK5O94991 958 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 GFAPP14136 432 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 GP5P40197 560 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 CHRNEQ04844 493 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 IFT88Q13099 833 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 FAM219BQ5XKK7 198 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 CDKL2Q92772 493 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 EXOSC8Q96B26 276 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 KLHDC3Q9BQ90 382 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 ERP44Q9BS26 406 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 NOL11Q9H8H0 719 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 SLC35C2Q9NQQ7 365 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 RNF14Q9UBS8 474 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 C19orf53Q9UNZ5 99 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
CSNK1D-219ENST00000581660 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 IL3P08700 152 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 MPIP34949 423 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 RAC3P60763 192 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 TRAF3Q13114 568 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
CSNK1D-219ENST00000581660 TTC19Q6DKK2 380 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms