RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MTERF4Q7Z6M4 381 aaKnown RBP9.45□□□□□ -0.9
RFFL-209ENST00000581265 WFDC8Q8IUA0 241 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 GABRG1Q8N1C3 465 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 GATSQ8NAP1 163 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 STEAP2Q8NFT2 490 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 OR2T11Q8NH01 316 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 B4GALNT2Q8NHY0 566 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 RNF128Q8TEB7 428 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 SH3YL1Q96HL8 342 aaPredicted RBP9.45□□□□□ -0.9
RFFL-209ENST00000581265 KLHL15Q96M94 604 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TSSK3Q96PN8 268 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 STACQ99469 402 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 KLHDC3Q9BQ90 382 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TRMOQ9BU70 441 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 BTBD2Q9BX70 525 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TUBB1Q9H4B7 451 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TMEM185BQ9H7F4 350 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TIGARQ9NQ88 270 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 DUSP22Q9NRW4 184 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 GIN1Q9NXP7 522 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 TMED5Q9Y3A6 229 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 CADP27708 2225 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 FREM1Q5H8C1 2179 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ABCA1O95477 2261 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 OVOL3O00110 214 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ZNF195O14628 629 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 LSM1O15116 133 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 GCM2O75603 506 aaPredicted RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 SOX30O94993 753 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 HMGN2P05204 90 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 FGF4P08620 206 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 LINC00032P0C843 101 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 NEFHP12036 1026 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ELK4P28324 431 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ASMTP46597 345 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 PRIM2P49643 509 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ZNF844Q08AG5 666 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 TNK1Q13470 666 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 P2RY6Q15077 328 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 RNPS1Q15287 305 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 CD226Q15762 336 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ZNF239Q16600 458 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 KLHL26Q53HC5 615 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 TMEM201Q5SNT2 666 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 SFRP5Q5T4F7 317 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 LIPMQ5VYY2 423 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 DNAJC14Q6Y2X3 702 aaPredicted RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 R3HCC1LQ7Z5L2 792 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 TDRPQ86YL5 185 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 COX18Q8N8Q8 333 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 LILRB1Q8NHL6 650 aaPredicted RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 FBXO30Q8TB52 745 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ABHD3Q8WU67 409 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ROBO4Q8WZ75 1007 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 HSD17B8Q92506 261 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 AKAP1Q92667 903 aaKnown RBP eCLIP9.44□□□□□ -0.9
RFFL-209ENST00000581265 CPNE4Q96A23 557 aaPredicted RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 S100PBPQ96BU1 408 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 FAM120BQ96EK7 910 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 USB1Q9BQ65 265 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 HOXD1Q9GZZ0 328 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 C12orf65Q9H3J6 166 aaKnown RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 PIGUQ9H490 435 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 C12orf49Q9H741 205 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 NGBQ9NPG2 151 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 SIRT3Q9NTG7 399 aaPredicted RBP9.44□□□□□ -0.9
RFFL-209ENST00000581265 KLHL13Q9P2N7 655 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ICAM5Q9UMF0 924 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 LAMP3Q9UQV4 416 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 DNAJC15Q9Y5T4 150 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 ACTL7BQ9Y614 415 aa9.44□□□□□ -0.9
RFFL-209ENST00000581265 GJE1A6NN92 205 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 TRIM13O60858 407 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 PRKD3O94806 890 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 CHEK2O96017 543 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 YES1P07947 543 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 DANCRP0C864 163 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 BCKDHAP12694 445 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 DDX5P17844 614 aaKnown RBP9.43□□□□□ -0.9
RFFL-209ENST00000581265 SHC1P29353 583 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 SFTPDP35247 375 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 RPS4XP62701 263 aaKnown RBP9.43□□□□□ -0.9
RFFL-209ENST00000581265 POU6F2P78424 691 aaPredicted RBP9.43□□□□□ -0.9
RFFL-209ENST00000581265 ZNF117Q03924 483 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 ETFDHQ16134 617 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 UGT3A2Q3SY77 523 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 NCMAPQ5T1S8 102 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 CCNJQ5T5M9 372 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 KANK2Q63ZY3 851 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 CBLN3Q6UW01 205 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 LRIG3Q6UXM1 1119 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 TFAP2EQ6VUC0 442 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 NUFIP2Q7Z417 695 aaKnown RBP9.43□□□□□ -0.9
RFFL-209ENST00000581265 SZRD1Q7Z422 152 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 C10orf107Q8IVU9 208 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 TUSC5Q8IXB3 177 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 SLC43A2Q8N370 569 aa9.43□□□□□ -0.9
RFFL-209ENST00000581265 CEP112Q8N8E3 955 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms