RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 SPATA19Q7Z5L4 167 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 RNF130Q86XS8 419 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 GTPBP8Q8N3Z3 284 aaPredicted RBP11.31□□□□□ -0.6
CBX1-206ENST00000581003 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 NATD1Q8N6N6 113 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 CHDHQ8NE62 594 aaPredicted RBP11.31□□□□□ -0.6
CBX1-206ENST00000581003 LINC01560Q8TB33 94 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 RAB3IL1Q8TBN0 382 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
CBX1-206ENST00000581003 MOAP1Q96BY2 351 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 ZG16BQ96DA0 208 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 ADGRG7Q96K78 797 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 CCDC115Q96NT0 180 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 EBF4Q9BQW3 602 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 RUBCNLQ9H714 662 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 MCCC2Q9HCC0 563 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 GALNT8Q9NY28 637 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 USH1CQ9Y6N9 552 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 POLQO75417 2590 aa11.31□□□□□ -0.6
CBX1-206ENST00000581003 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 PKDREJQ9NTG1 2253 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 A0A0J9YW62 118 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 CCDC154A6NI56 674 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TRPC5OSA6NMA1 111 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TNFSF11O14788 317 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 KLF11O14901 512 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 CXCL13O43927 109 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 UGT2B17O75795 530 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 PGRP06401 933 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 KRT16P08779 473 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 KLK2P20151 261 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 SFTPDP35247 375 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 CHI3L1P36222 383 aaPredicted RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 CPOXP36551 454 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 EIF1AXP47813 144 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 ZNF41P51814 821 aaPredicted RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 ATP12AP54707 1039 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 ARHGAP11BQ3KRB8 267 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TYW3Q6IPR3 259 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 HEPHL1Q6MZM0 1159 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 C16orf62Q7Z3J2 963 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 BTLAQ7Z6A9 289 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TMEM200AQ86VY9 491 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 LRRC34Q8IZ02 419 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TMCO5AQ8N6Q1 288 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 ANKFN1Q8N957 763 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 CNEP1R1Q8N9A8 125 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 OR10D3Q8NH80 312 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 FBXO27Q8NI29 283 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 PIWIL2Q8TC59 973 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 XAGE5Q8WWM1 108 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 STARD4Q96DR4 205 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 THOC1Q96FV9 657 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 AURKBQ96GD4 344 aaPredicted RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 OR52E6Q96RD3 313 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 PANX1Q96RD7 426 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 TM9SF2Q99805 663 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 ZNF559Q9BR84 538 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 GPATCH1Q9BRR8 931 aaKnown RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 SFXN3Q9BWM7 321 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 ZNF350Q9GZX5 532 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
CBX1-206ENST00000581003 LIME1Q9H400 295 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
CBX1-206ENST00000581003 SERINC4A6NH21 518 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 HMGN4O00479 90 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 KIAA0513O60268 411 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 ADAM11O75078 769 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 CYP7B1O75881 506 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 SMNDC1O75940 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
CBX1-206ENST00000581003 NUDT14O95848 222 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 CHRM4P08173 479 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 UBL4AP11441 157 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 ZNF17P17021 662 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 LCN1P31025 176 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 CCKARP32238 428 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 OPRM1P35372 400 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
CBX1-206ENST00000581003 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 CCR4P51679 360 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 SKP2Q13309 424 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 SF3B4Q15427 424 aaKnown RBP eCLIP11.29□□□□□ -0.64e-8■■■■■ 38.9
CBX1-206ENST00000581003 MAPK11Q15759 364 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 SYPL1Q16563 259 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
CBX1-206ENST00000581003 EPGNQ6UW88 154 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 METTL25Q8N6Q8 603 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 ATP6V1C2Q8NEY4 427 aa11.29□□□□□ -0.6
CBX1-206ENST00000581003 GOT1L1Q8NHS2 421 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms