RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TATDN3Q17R31 274 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PRTGQ2VWP7 1150 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 CYP27C1Q4G0S4 372 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 USP53Q70EK8 1073 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 WDR5BQ86VZ2 330 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 LGI4Q8N135 537 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 GPR151Q8TDV0 419 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF43-202ENST00000577625 TCTN2Q96GX1 697 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 BCL2L10Q9HD36 194 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 RASSF1Q9NS23 344 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 NTMQ9P121 344 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 SPACA6W5XKT8 324 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 SEC16AO15027 2179 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 TLCD2A6NGC4 264 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 RHPN2P1A8MT19 583 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 CYR61O00622 381 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 CDK1P06493 297 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 NR2F1P10589 423 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 C21orf33P30042 268 aaPredicted RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 GABRA4P48169 554 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 DHPSP49366 369 aaPredicted RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 SHC2P98077 582 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 SPIBQ01892 262 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF43-202ENST00000577625 SHBQ15464 509 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PMS2CLQ68D20 193 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 TMEM81Q6P7N7 255 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 C16orf62Q7Z3J2 963 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ATG16L2Q8NAA4 619 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 ZBTB44Q8NCP5 570 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 TMEM52Q8NDY8 209 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 GPR32P1Q8NGA4 272 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 BBS10Q8TAM1 723 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 KAT2AQ92830 837 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 FBXW5Q969U6 566 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 TRMT61AQ96FX7 289 aaKnown RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 TGM7Q96PF1 710 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PITX2Q99697 317 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 RSPO3Q9BXY4 272 aaPredicted RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 PLCXD1Q9NUJ7 323 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
RNF43-202ENST00000577625 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 EPHA6Q9UF33 1036 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 PSORS1C1Q9UIG5 152 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 GMEB2Q9UKD1 530 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 IGHV5-51A0A0C4DH38 117 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 SGK494L7N484 410 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 TSC22D2O75157 780 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 RHCEP18577 417 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 AZGP1P25311 298 aaKnown RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 KIR2DL3P43628 341 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 KCNJ5P48544 419 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 SIGLEC14Q08ET2 396 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 FUT5Q11128 374 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 MRPL28Q13084 256 aaKnown RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 MLIPQ5VWP3 458 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 PLET1Q6UQ28 207 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 PHC2Q8IXK0 858 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 APH1BQ8WW43 257 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 COL21A1Q96P44 957 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 YIPF4Q9BSR8 244 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 RAB33BQ9H082 229 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 LRIT1Q9P2V4 623 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 SEC14L3Q9UDX4 400 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 ALG5Q9Y673 324 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 ADAMTS20P59510 1910 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 SRPX2O60687 465 aaPredicted RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 ZNF254O75437 659 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 RDH16O75452 317 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 CPMP14384 443 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 PPM1FP49593 454 aaPredicted RBP12.83□□□□□ -0.36
RNF43-202ENST00000577625 MAN2A2P49641 1150 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 HMGA2P52926 109 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 CDH12P55289 794 aa12.83□□□□□ -0.36
RNF43-202ENST00000577625 S100A12P80511 92 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms