RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZSWIM7Q19AV6 140 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 LINC00696Q6ZRV3 163 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 FAM71CQ8NEG0 241 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 RNF138Q8WVD3 245 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 SH3YL1Q96HL8 342 aaPredicted RBP22■■□□□ 1.11
ATPAF1-213ENST00000574428 METTL7AQ9H8H3 244 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 RHCGQ9UBD6 479 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 FFAR1O14842 300 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 ADAM11O75078 769 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CCL11P51671 97 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 SOX8P57073 446 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 PPP1R8Q12972 351 aaKnown RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CBLN3Q6UW01 205 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CCDC81Q6ZN84 652 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 DND1Q8IYX4 353 aaKnown RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 ICA1LQ8NDH6 482 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CENPNQ96H22 339 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF347Q96SE7 839 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 PIP5K1AQ99755 562 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 NTN4Q9HB63 628 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF264O43296 627 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CAPNS1P04632 268 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 RHCEP18577 417 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 FUT4P22083 530 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CLK3P49761 638 aaKnown RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 IST1P53990 364 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF117Q03924 483 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 FOXD4Q12950 439 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 SKP2Q13309 424 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 PIN1Q13526 163 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 RANBP3LQ86VV4 465 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CYP4Z2PQ8N1L4 340 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 TMCO5AQ8N6Q1 288 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 PHF10Q8WUB8 498 aaKnown RBP21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 MCHR1Q99705 422 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 U3KQV3 271 aa21.99■■□□□ 1.11
ATPAF1-213ENST00000574428 CACNA1AO00555 2505 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 CPSF4LA6NMK7 179 aaKnown RBP21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 AP3D1O14617 1153 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 GMFGO60234 142 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 CCL3P10147 92 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 HTR2AP28223 471 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 RRM2P31350 389 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 RYKP34925 604 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 PTGDSP41222 190 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 CASP3P42574 277 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 HLCSP50747 726 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 GAS1P54826 345 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 SPIBQ01892 262 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 OC90Q02509 493 aaPredicted RBP21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 PRAMEF20Q5VT98 475 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 AGAP7PQ5VUJ5 663 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 MDGA2Q7Z553 956 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 CYP4Z1Q86W10 505 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 CPAMD8Q8IZJ3 1885 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 AGAP4Q96P64 663 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 BDH2Q9BUT1 245 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 SH2D2AQ9NP31 389 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 ABI3Q9P2A4 366 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 A4GNTQ9UNA3 340 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 KCNMB2Q9Y691 235 aa21.98■■□□□ 1.11
ATPAF1-213ENST00000574428 RRP8O43159 456 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 HCRTR2O43614 444 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 ACAA2P42765 397 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 CYB561P49447 251 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 CCR4P51679 360 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 AQP4P55087 323 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 ENTPD8Q5MY95 495 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 RTL4Q6ZR62 310 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF605Q86T29 641 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 DUSP19Q8WTR2 217 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 RYDENQ9NUL5 291 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 RAXQ9Y2V3 346 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 NCOR2Q9Y618 2525 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 SAC3D1A6NKF1 404 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 PRSS23O95084 383 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 CDH12P55289 794 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 TAS2R41P59536 307 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 OR5M10Q6IEU7 315 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF550Q7Z398 422 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 OR52J3Q8NH60 311 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 PAQR8Q8TEZ7 354 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 SLC35B4Q969S0 331 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 SGCZQ96LD1 299 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 PRRC1Q96M27 445 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 KLHDC3Q9BQ90 382 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 OSBPL11Q9BXB4 747 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 EVA1AQ9H8M9 152 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 REEP1Q9H902 201 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 PLA2G3Q9NZ20 509 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 TESQ9UGI8 421 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 CNOT11Q9UKZ1 510 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 CFAP47Q6ZTR5 3102 aa21.97■■□□□ 1.11
ATPAF1-213ENST00000574428 WDPCPO95876 746 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 CD96P40200 585 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 RPP38P78345 283 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 TLE3Q04726 772 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 TUBA3CQ13748 450 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 SLC22A10Q63ZE4 541 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 TUBA3EQ6PEY2 450 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms