RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FAM110BQ8TC76 370 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 ACTRT2Q8TDY3 377 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 NUDT8Q8WV74 236 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 PIK3IP1Q96FE7 263 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 ZC3HAV1LQ96H79 300 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 REXO5Q96IC2 774 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 OR7D2Q96RA2 312 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 NPAS1Q99742 590 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 TMEM109Q9BVC6 243 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 PARD6BQ9BYG5 372 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 DPY30Q9C005 99 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 KLHL4Q9C0H6 718 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 C6orf203Q9P0P8 240 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 PCDHGB4Q9UN71 923 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 TESMINQ9Y4I5 508 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 VPS13CQ709C8 3753 aa8.67□□□□□ -1.02
NPLOC4-212ENST00000573328 FLNAP21333 2647 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 TM9SF1O15321 606 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 BIRC5O15392 142 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 DIAPH2O60879 1101 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CYP7B1O75881 506 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 SOX30O94993 753 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CD8BP10966 210 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 BGNP21810 368 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 UGT2B10P36537 528 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 SLC6A8P48029 635 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 SLC1A6P48664 564 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 P2RX1P51575 399 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CLDN8P56748 225 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 RPS26P62854 115 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 RAC1P63000 192 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 HBA1P69905 142 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 OCRLQ01968 901 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 EMX2Q04743 252 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 TMEM44Q2T9K0 475 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ZNF474Q6S9Z5 364 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ESPNLQ6ZVH7 1005 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 C16orf62Q7Z3J2 963 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CAMKMTQ7Z624 323 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 TGIF2LYQ8IUE0 185 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CLECL1Q8IZS7 167 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 KIRREL3Q8IZU9 778 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ANKRD42Q8N9B4 389 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ATP6V1C2Q8NEY4 427 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 OR6K3Q8NGY3 331 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 OR2V1Q8NHB1 315 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 COQ8BQ96D53 544 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 GMPPAQ96IJ6 420 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 KLHL15Q96M94 604 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ZIM3Q96PE6 472 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 HOXD1Q9GZZ0 328 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CXXC4Q9H2H0 198 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 AKTIPQ9H8T0 292 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 SSU72Q9NP77 194 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 ELOVL5Q9NYP7 299 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 RAP2CQ9Y3L5 183 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
NPLOC4-212ENST00000573328 A0A0J9YW62 118 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 C7orf72A4D263 438 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 GJE1A6NN92 205 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 C16orf97H3BN30 126 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 SNUPNO95149 360 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 ATE1O95260 518 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 TUBBP07437 444 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 UBL4AP11441 157 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 KLK2P20151 261 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 MATN1P21941 496 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 ELK4P28324 431 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 CCKARP32238 428 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 RPL14P50914 215 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 ATP12AP54707 1039 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 CASP9P55211 416 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 SUMO3P55854 103 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 STX3Q13277 289 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 GPR68Q15743 365 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 SMU1Q2TAY7 513 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 DEFB113Q30KQ7 82 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 EXOSC6Q5RKV6 272 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 PDZK1Q5T2W1 519 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 CBLN3Q6UW01 205 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 C6orf120Q7Z4R8 191 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
NPLOC4-212ENST00000573328 ANKRD46Q86W74 232 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms