RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 CNIH4Q9P003 139 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 DAPK2Q9UIK4 370 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PCDHGB7Q9Y5F8 929 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 A0A087WV62 115 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TEX51A0A1B0GUA7 166 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 SNAP29O95721 258 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 DDAH2O95865 285 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 GP1BAP07359 652 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 CDH11P55287 796 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 ITGADQ13349 1161 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 OR1Q1Q15612 314 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 CARD17Q5XLA6 110 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 SAXO2Q658L1 398 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 WBP2NLQ6ICG8 309 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 MARCH3Q86UD3 253 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TEX19Q8NA77 164 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 LMF2Q9BU23 707 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 DPH1Q9BZG8 443 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 DSN1Q9H410 356 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 HMG20AQ9NP66 347 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 UPB1Q9UBR1 384 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 OR2J2O76002 312 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ZNF43P17038 809 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 DPP4P27487 766 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 RELAQ04206 551 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 MAPK11Q15759 364 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 TCTN3Q6NUS6 607 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 XKR5Q6UX68 686 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ZNF100Q8IYN0 542 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 LILRA2Q8N149 483 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 C1GALT1C1Q96EU7 318 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 SLC41A2Q96JW4 573 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ZNF597Q96LX8 424 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 BRD7Q9NPI1 651 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ASB6Q9NWX5 421 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 DNAJC27Q9NZQ0 273 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 YARS2Q9Y2Z4 477 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 NINQ8N4C6 2090 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ANAPC1Q9H1A4 1944 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 A0A1W2PQM1 296 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PRAMEF25A6NGN4 478 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 HMGN4O00479 90 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 FCMRO60667 390 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 POU3F2P20265 443 aaPredicted RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 EIF1AXP47813 144 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 CLRN1P58418 232 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 MEP1AQ16819 746 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 RPL13AP3Q6NVV1 102 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PGM2L1Q6PCE3 622 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 QSOX2Q6ZRP7 698 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PMM1Q92871 262 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 SLC29A1Q99808 456 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ARMC1Q9NVT9 282 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 SH3BGRL2Q9UJC5 107 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 KLRC4-KLRK1H3BQV0 150 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ACOX3O15254 700 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 TPD52L2O43399 206 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 GDF9O60383 454 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ADAP00813 363 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 FUT1P19526 365 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 CTXN1P60606 82 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 CSNK2BP67870 215 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 CHAF1BQ13112 559 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 INAQ16352 499 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PRTGQ2VWP7 1150 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 GFOD2Q3B7J2 385 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 EEF1A1P5Q5VTE0 462 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 AGAP7PQ5VUJ5 663 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 HDDC2Q7Z4H3 204 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 VASH2Q86V25 355 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 MEX3DQ86XN8 651 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 MISPQ8IVT2 679 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ACOT11Q8WXI4 607 aaPredicted RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 TAMM41Q96BW9 452 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 AGAP4Q96P64 663 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 SRA1Q9HD15 236 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 LRFN1Q9P244 771 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 TNFRSF10DQ9UBN6 386 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 TESQ9UGI8 421 aaKnown RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 EFCAB10A6NFE3 127 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 MKRN2OSH3BPM6 223 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 HTR3AP46098 478 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 NUBP1P53384 320 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 CRISP1P54107 249 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 RNF4P78317 190 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 LSAMPQ13449 338 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 PUM1Q14671 1186 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMG6-213ENST00000573166 OR7A5Q15622 319 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 TMEM176BQ3YBM2 270 aaPredicted RBP9.36□□□□□ -0.91
SMG6-213ENST00000573166 ZFAND2BQ8WV99 257 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 LRFN3Q9BTN0 628 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 IKZF5Q9H5V7 419 aa9.36□□□□□ -0.91
SMG6-213ENST00000573166 ELL3Q9HB65 397 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms