RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CCDC7Q96M83 1385 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 ARPC4-TTLL3A0A0A6YYG9 625 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 NPIPA5A0A0B4J1W7 369 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 TRBV2A0A0J9YWF9 115 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 LINC00854A0A1B0GVQ3 168 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 CLRN2A0PK11 232 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 C19orf81C9J6K1 198 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 NPIPA5E9PKD4 350 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 FGFR1OPO95684 399 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 SLC35E2P0CK97 266 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF18P17022 549 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 POLR2EP19388 210 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 IDSP22304 550 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 GDF1P27539 372 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 TMOD1P28289 359 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 IL2RGP31785 369 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 ASMTP46597 345 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 SLC25A1P53007 311 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 RAG2P55895 527 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 ERVPABLB-1P60509 514 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 ARF5P84085 180 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 IMMTQ16891 758 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 USH1GQ495M9 461 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC40Q4G0X9 1142 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 LIPKQ5VXJ0 399 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 DPY19L2P2Q6ZN68 376 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 PYROXD2Q8N2H3 581 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 GPR137CQ8N3F9 429 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 RNF10Q8N5U6 811 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC148Q8NFR7 591 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 URGCPQ8TCY9 931 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 VN1R17PQ8TDU5 208 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 LHX4Q969G2 390 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 C11orf24Q96F05 449 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 EEF2KMTQ96G04 330 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 VSIG2Q96IQ7 327 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 SERAC1Q96JX3 654 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 UQCC2Q9BRT2 126 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 TSGA10Q9BZW7 698 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIM4Q9C037 500 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 VPS37BQ9H9H4 285 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 VNN3Q9NY84 501 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 EMC3Q9P0I2 261 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 HOOK1Q9UJC3 728 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 PURGQ9UJV8 347 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 DNPEPQ9ULA0 475 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 DUSP12Q9UNI6 340 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 MOKQ9UQ07 419 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 CAB39Q9Y376 341 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 GMEB1Q9Y692 573 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 C4BP0C0L5 1744 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 COL5A3P25940 1745 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 THSD7BQ9C0I4 1608 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIOBPQ9H2D6 2365 aa2.78□□□□□ -1.97
HERPUD1-212ENST00000567944 FER1L6Q2WGJ9 1857 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 KDM6AO15550 1401 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 AFDNP55196 1824 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ROCK2O75116 1388 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 C4AP0C0L4 1744 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC171Q6TFL3 1326 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 KLF18A0A0U1RQI7 1052 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 EFCAB7A8K855 629 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 DDX39AO00148 427 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 EI24O14681 340 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ADAM12O43184 909 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 STK17BO94768 372 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PRAMEF12O95522 483 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 CXCL10P02778 98 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 P0C879 139 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 SFTPCP11686 197 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PGAM2P15259 253 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF19P17023 458 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ARF4P18085 180 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 AZU1P20160 251 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 CA8P35219 290 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 GCKP35557 465 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ARHGDIBP52566 201 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 MRPS15P82914 257 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC10A1Q14973 349 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ZIC1Q15915 447 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 SNCBQ16143 134 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 FHL5Q5TD97 284 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 THOC7Q6I9Y2 204 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PLBD1Q6P4A8 553 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 RABEPKQ7Z6M1 372 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TMEM110Q86TL2 294 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 SPATA24Q86W54 205 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF525Q8N782 197 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TRIML2Q8N7C3 387 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 COLGALT1Q8NBJ5 622 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 OR52K2Q8NGK3 314 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 EXOC6Q8TAG9 804 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ATP6V0A1Q93050 837 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 DNAJA3Q96EY1 480 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 C16orf45Q96MC5 204 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 C9orf85Q96MD7 179 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC43Q96MW1 224 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms