RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 STEAP2Q8NFT2 490 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 ADAMTS15Q8TE58 950 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 KLHL15Q96M94 604 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 RNF145Q96MT1 663 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 GATA5Q9BWX5 397 aaPredicted RBP16.68■□□□□ 0.26
LINC01238-205ENST00000567549 ACTRT3Q9BYD9 372 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 PIGUQ9H490 435 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 ATP6V1HQ9UI12 483 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 TRAF6Q9Y4K3 522 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 PCNX3Q9H6A9 2034 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GTPBP1O00178 669 aaKnown RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 CXCL13O43927 109 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 SHBGP04278 402 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 HEXAP06865 529 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 ACP2P11117 423 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 BCKDHAP12694 445 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 CCKARP32238 428 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 IFFO1Q0D2I5 559 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 APOOLQ6UXV4 268 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 SSX8Q7RTT4 187 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 ZNF550Q7Z398 422 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 LILRA2Q8N149 483 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GATSQ8NAP1 163 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 CLHC1Q8NHS4 586 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 PHOSPHO1Q8TCT1 267 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 EPS8L3Q8TE67 593 aaKnown RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 TMEM171Q8WVE6 324 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 OR5P2Q8WZ92 322 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GIMAP5Q96F15 307 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 SH3YL1Q96HL8 342 aaPredicted RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GSX1Q9H4S2 264 aaPredicted RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 TNFRSF12AQ9NP84 129 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 GPC6Q9Y625 555 aaPredicted RBP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 NIPBLQ6KC79 2804 aaeCLIP16.67■□□□□ 0.26
LINC01238-205ENST00000567549 DSCAMO60469 2012 aa16.67■□□□□ 0.26
LINC01238-205ENST00000567549 A0A1W2PPR1 153 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 TLDC2A0PJX2 215 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 DUXAA6NLW8 204 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 TNFSF11O14788 317 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 HMGN2P05204 90 aaKnown RBP16.66■□□□□ 0.26
LINC01238-205ENST00000567549 FESP07332 822 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 PSMB1P20618 241 aaKnown RBP16.66■□□□□ 0.26
LINC01238-205ENST00000567549 PRPS1L1P21108 318 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 CCT3P49368 545 aaKnown RBP16.66■□□□□ 0.26
LINC01238-205ENST00000567549 P2RX1P51575 399 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 ZNF385BQ569K4 471 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 CDC73Q6P1J9 531 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 SLC43A2Q8N370 569 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 OR2T11Q8NH01 316 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 FBXO30Q8TB52 745 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 SFXN5Q8TD22 340 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 OSTF1Q92882 214 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 TMEM109Q9BVC6 243 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 GSX2Q9BZM3 304 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 ROPN1BQ9BZX4 212 aaPredicted RBP16.66■□□□□ 0.26
LINC01238-205ENST00000567549 ROPN1Q9HAT0 212 aaPredicted RBP16.66■□□□□ 0.26
LINC01238-205ENST00000567549 BAIAP2L1Q9UHR4 511 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 PTGDR2Q9Y5Y4 395 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
LINC01238-205ENST00000567549 ABCA2Q9BZC7 2435 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 PIP5K1BO14986 540 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 AK1P00568 194 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 LASP1Q14847 261 aaKnown RBP16.65■□□□□ 0.26
LINC01238-205ENST00000567549 ARL13AQ5H913 290 aaPredicted RBP16.65■□□□□ 0.26
LINC01238-205ENST00000567549 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
LINC01238-205ENST00000567549 GALNT10Q86SR1 603 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 TOR1AIP2Q8NFQ8 470 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 ADGRG7Q96K78 797 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 TUBB1Q9H4B7 451 aa16.65■□□□□ 0.26
LINC01238-205ENST00000567549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.64■□□□□ 0.25
LINC01238-205ENST00000567549 SHISA8B8ZZ34 492 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 CFLARO15519 480 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 MYZAPP0CAP1 466 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 SLC7A1P30825 629 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 CTU2Q2VPK5 515 aaKnown RBP16.64■□□□□ 0.25
LINC01238-205ENST00000567549 CEP85LQ5SZL2 805 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 DCST2Q5T1A1 773 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 STAC2Q6ZMT1 411 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF704Q6ZNC4 412 aaPredicted RBP16.64■□□□□ 0.25
LINC01238-205ENST00000567549 BANPQ8N9N5 519 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 PSMA8Q8TAA3 256 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 CDS1Q92903 461 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 PERPQ96FX8 193 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 COX4I2Q96KJ9 171 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 MRGPRX4Q96LA9 322 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 Q96MF0 132 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 BHLHE41Q9C0J9 482 aaPredicted RBP16.64■□□□□ 0.25
LINC01238-205ENST00000567549 ACTR6Q9GZN1 396 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 CLEC4AQ9UMR7 237 aa16.64■□□□□ 0.25
LINC01238-205ENST00000567549 SIAH2O43255 324 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 EIF4E2O60573 245 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 PEX11AO75192 247 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 PRKD3O94806 890 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 SNUPNO95149 360 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 AGR2O95994 175 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms