RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 IFNA14P01570 189 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
CLK3-218ENST00000566926 RFPL3SP0C7P2 107 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 GCKP35557 465 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 CLK3P49761 638 aaKnown RBP12.25□□□□□ -0.45
CLK3-218ENST00000566926 MVDP53602 400 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 PRKAG1P54619 331 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 DSTNP60981 165 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 TOMM20Q15388 145 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 GXYLT1Q4G148 440 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLK3-218ENST00000566926 GLYATQ6IB77 296 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 OR5AK3PQ8NH89 298 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 NEIL3Q8TAT5 605 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 PNPT1Q8TCS8 783 aaKnown RBP12.25□□□□□ -0.45
CLK3-218ENST00000566926 NTNG2Q96CW9 530 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 YY1AP1Q9H869 796 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 RNPEPL1Q9HAU8 725 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 HHATLQ9HCP6 504 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 A4GALTQ9NPC4 353 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 SDHAF3Q9NRP4 125 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 GIN1Q9NXP7 522 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 COQ3Q9NZJ6 369 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 EGFL7Q9UHF1 273 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 SAMD4AQ9UPU9 718 aaKnown RBP12.25□□□□□ -0.45
CLK3-218ENST00000566926 LIPT1Q9Y234 373 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 ANGPT4Q9Y264 503 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 C15orf41Q9Y2V0 281 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 PCDHGB3Q9Y5G1 929 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 KLF2Q9Y5W3 355 aaPredicted RBP12.25□□□□□ -0.45
CLK3-218ENST00000566926 LIPGQ9Y5X9 500 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 GNB5O14775 395 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 WDR1O75083 606 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 CLDN1O95832 211 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 HPNP05981 417 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 CELA3AP09093 270 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 FCGR1AP12314 374 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 GABRA1P14867 456 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 GABRA3P34903 492 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 SF3B4Q15427 424 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■■■□□ 18.1
CLK3-218ENST00000566926 SNCBQ16143 134 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ADRM1Q16186 407 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ATAD3BQ5T9A4 648 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 PRAMEF8Q5VWM4 474 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 PRAMEF7Q5VXH5 474 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ZZZ3Q8IYH5 903 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 HIPK4Q8NE63 616 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 GPR151Q8TDV0 419 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ITLN2Q8WWU7 325 aaPredicted RBP12.24□□□□□ -0.45
CLK3-218ENST00000566926 FIG4Q92562 907 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 FAM162AQ96A26 154 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 EFHD2Q96C19 240 aaPredicted RBP12.24□□□□□ -0.45
CLK3-218ENST00000566926 GNRHR2Q96P88 292 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 DMRTA2Q96SC8 542 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 UGT2B28Q9BY64 529 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ACTRT3Q9BYD9 372 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 UBQLN3Q9H347 655 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 S100A14Q9HCY8 104 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 EQTNQ9NQ60 294 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 GPATCH2Q9NW75 528 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 CALML5Q9NZT1 146 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
CLK3-218ENST00000566926 P2RX2Q9UBL9 471 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 RPS6KA6Q9UK32 745 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 ABCG2Q9UNQ0 655 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 WIF1Q9Y5W5 379 aa12.24□□□□□ -0.45
CLK3-218ENST00000566926 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
CLK3-218ENST00000566926 DHRS12A0PJE2 317 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 C5orf58C9J3I9 102 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 FAM47E-STBD1D6RA91 191 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ZNHIT1O43257 154 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 NME6O75414 186 aaPredicted RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 NKX2-2O95096 273 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 IL33O95760 270 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 AK1P00568 194 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 HMGN2P05204 90 aaKnown RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 ALOX5P09917 674 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ARAFP10398 606 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ETFAP13804 333 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ATP6V1B2P21281 511 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 MATN1P21941 496 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ACVR2AP27037 513 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 SLC7A1P30825 629 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PTGER4P35408 488 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 MSX2P35548 267 aaPredicted RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 PTGDSP41222 190 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ADORA2A-AS1P86434 159 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 CDK6Q00534 326 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 RCN1Q15293 331 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 FNDC7Q5VTL7 733 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 DESI1Q6ICB0 168 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 ZNF585AQ6P3V2 769 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PATL1Q86TB9 770 aaKnown RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PLCZ1Q86YW0 608 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PM20D2Q8IYS1 436 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 OR4N2Q8NGD1 307 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 RASSF5Q8WWW0 418 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 SLC9A6Q92581 669 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms