RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 OTUD3Q5T2D3 398 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-209ENST00000566240 PVRIGQ6DKI7 326 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 PAQR6Q6TCH4 344 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 ZNF497Q6ZNH5 498 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 CCDC80Q76M96 950 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 NLRP9Q7RTR0 991 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 MOB3BQ86TA1 216 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 C15orf54Q8N8G6 183 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 OR2T33Q8NG76 320 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 OR6T1Q8NGN1 323 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 OR9A4Q8NGU2 314 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 RNF139Q8WU17 664 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 BADQ92934 168 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 ZNF599Q96NL3 588 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 VGLL1Q99990 258 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 TUBGCP2Q9BSJ2 902 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 TM2D1Q9BX74 207 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 PNNQ9H307 717 aaKnown RBP3.98□□□□□ -1.77
CNOT1-209ENST00000566240 IKZF5Q9H5V7 419 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 GNB4Q9HAV0 340 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 SLC17A5Q9NRA2 495 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 ARMCX1Q9P291 453 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 CDH9Q9ULB4 789 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 CUX1P39880 1505 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 PNPLA6Q8IY17 1366 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 FANCD2Q9BXW9 1451 aa3.98□□□□□ -1.77
CNOT1-209ENST00000566240 CTTNBP2Q8WZ74 1663 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CEP162Q5TB80 1403 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 A0A1W2PPR1 153 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 XKRY2A2RUG3 117 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CCT8L1PA6NM43 557 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 H0Y8G0 127 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 H3BMQ9 156 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 GALR3O60755 368 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 VENTXO95231 258 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 HPP00738 406 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CT45A10P0DMU9 189 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 P2RY1P47900 373 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 HMGCS2P54868 508 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 ST3GAL3Q11203 375 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 RAB40BQ12829 278 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 SLC10A1Q14973 349 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CEP85LQ5SZL2 805 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 METTL7BQ6UX53 244 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CCBE1Q6UXH8 406 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 ZYG11AQ6WRX3 759 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 Q6ZTC4 211 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 GPRIN3Q6ZVF9 776 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 CDH26Q8IXH8 852 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 ZNF440Q8IYI8 595 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 OR5L2Q8NGL0 311 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 ADAMTS16Q8TE57 1224 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 TFB1MQ8WVM0 346 aaKnown RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 TRUB1Q8WWH5 349 aaKnown RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 NT5C3BQ969T7 300 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 ZBED6CLQ96FA7 236 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 TMEM80Q96HE8 168 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 OR5B2Q96R09 309 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 PSMB7Q99436 277 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 TRIM15Q9C019 465 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 OPN3Q9H1Y3 402 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-209ENST00000566240 SENP1Q9P0U3 644 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 SLC2A6Q9UGQ3 507 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 MEMO1Q9Y316 297 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 TNIKQ9UKE5 1360 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 KIF21AQ7Z4S6 1674 aa3.97□□□□□ -1.77
CNOT1-209ENST00000566240 PDS5BQ9NTI5 1447 aa3.96□□□□□ -1.77
CNOT1-209ENST00000566240 WDR97A6NE52 1622 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 LRP5LA4QPB2 252 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 HELTA6NFD8 242 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 E9PAM4 449 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 G3V4G9 280 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SAP18O00422 153 aaKnown RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 FCN1O00602 326 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 FCMRO60667 390 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SH3BGRLO75368 114 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 HOXD4P09016 255 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 ALOX5P09917 674 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 ACADSP16219 412 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 MMP11P24347 488 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 CASP4P49662 377 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 ACTR3P61158 418 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 VLDLRP98155 873 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 KCNJ11Q14654 390 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 TIGITQ495A1 244 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 PHYHD1Q5SRE7 291 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 WSCD1Q658N2 575 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 TAS2R42Q7RTR8 314 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SLC25A42Q86VD7 318 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 SLC47A2Q86VL8 602 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 HIPK1Q86Z02 1210 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 CLEC4FQ8N1N0 589 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 CSNK1A1LQ8N752 337 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 Q8N9G6 341 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-209ENST00000566240 C17orf47Q8NEP4 570 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 OR56B2PQ8NGI1 322 aa3.96□□□□□ -1.78
CNOT1-209ENST00000566240 ZNF689Q96CS4 500 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms