RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ABRAXAS2Q15018 415 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CD300LGQ6UXG3 332 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZNF679Q8IYX0 411 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 KDM8Q8N371 416 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 SUN3Q8TAQ9 357 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 DUSP19Q8WTR2 217 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FRZBQ92765 325 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PNPLA2Q96AD5 504 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 INTS14Q96SY0 518 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 MYOZ2Q9NPC6 264 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 MRPL22Q9NWU5 206 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 BACE2Q9Y5Z0 518 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 UBIAD1Q9Y5Z9 338 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 A0A1W2PPQ1 181 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 I6L893 689 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 CYB5BO43169 146 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 MMP15P51511 669 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 DVL1P1P54792 670 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 HLXQ14774 488 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 RTL6Q6ICC9 239 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 USP53Q70EK8 1073 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TMPRSS9Q7Z410 1059 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 NANOGP1Q8N7R0 232 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR2D3Q8NGH3 330 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR6K3Q8NGY3 331 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FAM163AQ96GL9 167 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 FAM46AQ96IP4 442 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 NECTIN4Q96NY8 510 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GAL3ST2Q9H3Q3 398 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FABP4P15090 132 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PYCR1P32322 319 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 GRM5P41594 1212 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RFX3P48380 749 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 NRG3P56975 720 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ACSM1Q08AH1 577 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ZNF266Q14584 549 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 OR52W1Q6IF63 320 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 DCBLD1Q8N8Z6 715 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 OR10Q1Q8NGQ4 319 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 AMBRA1Q9C0C7 1298 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 TAF9BQ9HBM6 251 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 DLL4Q9NR61 685 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SIRT7Q9NRC8 400 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 HAS3O00219 553 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 EIF3GO75821 320 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLK3-212ENST00000563418 C22orf31O95567 290 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RNH1P13489 461 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 PFKLP17858 780 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 HRH2P25021 359 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 IL10RBQ08334 325 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 CLEC10AQ8IUN9 316 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RIMKLAQ8IXN7 391 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 JAGN1Q8N5M9 183 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SAT2Q96F10 170 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 CIPCQ9C0C6 399 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 MKKSQ9NPJ1 570 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 ATAD5Q96QE3 1844 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 TCRBV5S2A0A599 114 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 C19orf81C9J6K1 198 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 CRYBA1P05813 215 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SYPP08247 313 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 NDUFV2P19404 249 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ILKQ13418 452 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RPE65Q16518 533 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RBMS3Q6XE24 437 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 ZNF551Q7Z340 670 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 LILRB2Q8N423 598 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 FAM46BQ96A09 425 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 CDKN2AIPNLQ96HQ2 116 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PACRGQ96M98 296 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 TMPRSS13Q9BYE2 586 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 CXXC1Q9P0U4 656 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 GALPQ9UBC7 116 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 BTNL2Q9UIR0 455 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 RIPK3Q9Y572 518 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ZNF195O14628 629 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SLC25A12O75746 678 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 GBAP04062 536 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SLC6A1P30531 599 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ECI1P42126 302 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 BDKRB1P46663 353 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PRKAG1P54619 331 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 HMGCS1Q01581 520 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 FPGSQ05932 587 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 CAPSQ13938 189 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PCBP2Q15366 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLK3-212ENST00000563418 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 TMEM71Q6P5X7 295 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PGLYRP2Q96PD5 576 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 TSGA13Q96PP4 275 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SORCS2Q96PQ0 1159 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 HBEGFQ99075 208 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 PARPBPQ9NWS1 579 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 SOHLH2Q9NX45 425 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 AGO1Q9UL18 857 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 YARS2Q9Y2Z4 477 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 NAV1Q8NEY1 1877 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 H3BQ06 376 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 RTCAO00442 366 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 TREHO43280 583 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms