RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ATP6V1G2-DDX39BF2Z307 99 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 OR7A17O14581 309 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GUCY1B2O75343 617 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SUPT3HO75486 399 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 CLDN9O95484 217 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 OXSR1O95747 527 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 LTA4HP09960 611 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 EPHA1P21709 976 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 PCMT1P22061 227 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC12A2P55011 1212 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC18A2Q05940 514 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 FOXL1Q12952 345 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GTF2H2Q13888 395 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 FASTKD3Q14CZ7 662 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 ACAP2Q15057 778 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GABRA6Q16445 453 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 PRSS53Q2L4Q9 553 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SH2D4BQ5SQS7 431 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 FAM219BQ5XKK7 198 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 FRG2Q64ET8 278 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GTF2H2CQ6P1K8 395 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 KLHL17Q6TDP4 642 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 PAGE2Q7Z2X7 111 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GOLGA7Q7Z5G4 137 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC43A2Q8N370 569 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 LRRC39Q96DD0 335 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 MUS81Q96NY9 551 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 FRG2BQ96QU4 278 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SNX18Q96RF0 628 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 C1QTNF6Q9BXI9 259 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 TBL1XR1Q9BZK7 514 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 TRIM5Q9C035 493 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 IPPKQ9H8X2 491 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 ANKZF1Q9H8Y5 726 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 PSME2Q9UL46 239 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 USP22Q9UPT9 525 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 GXYLT2A0PJZ3 443 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF724A8MTY0 619 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 CXorf49A8MYA2 514 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 B4DSR2 109 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 C9JVG2 144 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 PDLIM1O00151 329 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TP73O15350 636 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 NDUFB5O43674 189 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 CYTIPO60759 359 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ITGA5P08648 1049 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 STMN1P16949 149 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ME2P23368 584 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ELK4P28324 431 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 NTF4P34130 210 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 GP5P40197 560 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 MAP3K8P41279 467 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ALDH9A1P49189 494 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 CLK3P49761 638 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 PPOXP50336 477 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 RAB10P61026 200 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 SNRPD2P62316 118 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 UBA52P62987 128 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TRA2BP62995 288 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 CHRNEQ04844 493 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF155Q12901 538 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 FOXF1Q12946 379 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TRAF3Q13114 568 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 SCGB2A2Q13296 93 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TRADDQ15628 312 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 DECR1Q16698 335 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 FBXW9Q5XUX1 488 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 UGT2A3Q6UWM9 527 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 GLCCI1Q86VQ1 547 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ANKMY2Q8IV38 441 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF786Q8N393 782 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 OR4C3Q8NH37 302 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 HOXB13Q92826 284 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TMEM186Q96B77 213 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF775Q96BV0 537 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF524Q96C55 264 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 REXO5Q96IC2 774 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 MS4A14Q96JA4 679 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 MRGPRX4Q96LA9 322 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 RBBP8Q99708 897 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 VRK1Q99986 396 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 LMF2Q9BU23 707 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TSPY26PQ9H489 355 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 PLK3Q9H4B4 646 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 FKRPQ9H9S5 495 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 TIGARQ9NQ88 270 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 FARSBQ9NSD9 589 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 HIF1ANQ9NWT6 349 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 NSMCE4AQ9NXX6 385 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 AHSPQ9NZD4 102 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 KLHL9Q9P2J3 617 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ANGPTL3Q9Y5C1 460 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 ARHGAP32A7KAX9 2087 aa6.72□□□□□ -1.33
HERPUD1-206ENST00000563343 A0A087WV62 115 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 GOLGA6L10A0A0M3HER8 536 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms