RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	ZNF544	Q6NX49	715 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	CCDC25	Q86WR0	208 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	CTAGE3P	Q8IX95	158 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	KLHL7	Q8IXQ5	586 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	LILRA2	Q8N149	483 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	PLD6	Q8N2A8	252 aa	Known RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	PPM1N	Q8N819	430 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	FAM110B	Q8TC76	370 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF483	Q8TF39	744 aa	Predicted RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	C16orf78	Q8WTQ4	265 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	SELENOM	Q8WWX9	145 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF75CP	Q92670	426 aa	Predicted RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	ATP6V1E2	Q96A05	226 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	EXOSC8	Q96B26	276 aa	Known RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	C1orf159	Q96HA4	380 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	TBL1XR1	Q9BZK7	514 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	COQ10B	Q9H8M1	238 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	EML4	Q9HC35	981 aa	Known RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092		Q9N2J8	555 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	CPSF2	Q9P2I0	782 aa	Known RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	MRTO4	Q9UKD2	239 aa	Known RBP	7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	TMCO1	Q9UM00	188 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	SNX6	Q9UNH7	406 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092	SNX24	Q9Y343	169 aa		7.33	□□□□□ -1.24
CKLF-208	ENST00000563092		A0A096LPK6	155 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	LOC100289279	A0A1B0GTE1	492 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GXYLT2	A0PJZ3	443 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ESPN	B1AK53	854 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SMAD9	O15198	467 aa	Known RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	RGS14	O43566	566 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	TCF21	O43680	179 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PCDH7	O60245	1069 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	LYZL6	O75951	148 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	NKX2-2	O95096	273 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	OXSR1	O95747	527 aa	Predicted RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	COL6A2	P12110	1019 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	CHN1	P15882	459 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	TCP1	P17987	556 aa	Known RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	DDC	P20711	480 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	HNF1A	P20823	631 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	IGHV1-2	P23083	117 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ME2	P23368	584 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PTAFR	P25105	342 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	EIF1	P41567	113 aa	Known RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	MAGEA12	P43365	314 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GSTM5	P46439	218 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC18A2	Q05940	514 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SPOCK1	Q08629	439 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC29A2	Q14542	456 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	MST1L	Q2TV78	715 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GLE1	Q53GS7	698 aa	Known RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	EXOSC6	Q5RKV6	272 aa	Known RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SH2D4B	Q5SQS7	431 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PPP4R4	Q6NUP7	873 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	KLC3	Q6P597	504 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	FCRLA	Q7L513	359 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC43A2	Q8N370	569 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF433	Q8N7K0	673 aa	Predicted RBP	7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	FBF1	Q8TES7	1133 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ZFAND2B	Q8WV99	257 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	HTRA1	Q92743	480 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ELP4	Q96EB1	424 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PHF21B	Q96EK2	531 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PSD2	Q9BQI7	771 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	ACPT	Q9BZG2	426 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	TRIM31	Q9BZY9	425 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	TMEM185B	Q9H7F4	350 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	CXorf36	Q9H7Y0	433 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	TIGAR	Q9NQ88	270 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PFDN4	Q9NQP4	134 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GIMAP4	Q9NUV9	329 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GRHL1	Q9NZI5	618 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	NTM	Q9P121	344 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	PRSS50	Q9UI38	385 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	GRID1	Q9ULK0	1009 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC25A15	Q9Y619	301 aa		7.32	□□□□□ -1.24
CKLF-208	ENST00000563092	IGHV4-61	A0A0C4DH41	118 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092		A0A1W2PQD3	144 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SERTM1	A2A2V5	107 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF724	A8MTY0	619 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	CCDC188	H7C350	402 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ETV2	O00321	342 aa	Predicted RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	MANBA	O00462	879 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	NDUFB5	O43674	189 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	GMFG	O60234	142 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	KCNH1	O95259	989 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ESRRB	O95718	433 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	RBP1	P09455	135 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SBK3	P0C264	359 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	DHRS4L1	P0CG22	281 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ITGA2	P17301	1181 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	GGT1	P19440	569 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ENPP1	P22413	925 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	CD40	P25942	277 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TYK2	P29597	1187 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	LCN1	P31025	176 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TIA1	P31483	386 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	STX2	P32856	288 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	GABRA3	P34903	492 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ARL1	P40616	181 aa	Predicted RBP	7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms