RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 FCARP24071 287 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 PTGFRP43088 359 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 WNT3P56703 355 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 ST8SIA6P61647 398 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 LGALS3BPQ08380 585 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 MICBQ29980 383 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 CD200R1LQ6Q8B3 271 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 CASP12Q6UXS9 341 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 USP53Q70EK8 1073 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 TMUB2Q71RG4 321 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 LRRC70Q7Z2Q7 622 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
CLK3-206ENST00000562078 BOLLQ8N9W6 283 aaKnown RBP12.41□□□□□ -0.42
CLK3-206ENST00000562078 OR5M9Q8NGP3 310 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 WNT2BQ93097 391 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 UBL7Q96S82 380 aaPredicted RBP12.41□□□□□ -0.42
CLK3-206ENST00000562078 MYADMQ96S97 322 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 CHST8Q9H2A9 424 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 ANKRD19PQ9H560 264 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 C14orf105Q9NVL8 296 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 OBP2AQ9NY56 170 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 TVP23BQ9NYZ1 205 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 MGAT4CQ9UBM8 478 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 EYSQ5T1H1 3165 aa12.41□□□□□ -0.42
CLK3-206ENST00000562078 GFYI3L273 518 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 GABRPO00591 440 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 TSPAN6O43657 245 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PRKYO43930 277 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SCN2BO60939 215 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 FZD7O75084 574 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SPDEFO95238 335 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PEPDP12955 493 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SLC6A12P48065 614 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 ARFIP1P53367 373 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 E2F1Q01094 437 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SNTB1Q13884 538 aaKnown RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 VITQ6UXI7 678 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 BTN2A1Q7KYR7 527 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 ZNF565Q8N9K5 539 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 APIPQ96GX9 242 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 APOLD1Q96LR9 279 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SYNDIG1Q9H7V2 258 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 DDX31Q9H8H2 851 aaKnown RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 TAS2R3Q9NYW6 316 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SLC22A14Q9Y267 594 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 DSPPQ9NZW4 1301 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 TRPM6Q9BX84 2022 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 OTOL1A6NHN0 477 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 PRRT4C9JH25 899 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 MID1O15344 667 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SOX30O94993 753 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 AKR7A3O95154 331 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 KLK3P07288 261 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 PBLDP30039 288 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 MAP4K2Q12851 820 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PDGFRLQ15198 375 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 FNDC3BQ53EP0 1204 aaKnown RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 ZNF660Q6AZW8 331 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 ELP2Q6IA86 826 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 ZNF770Q6IQ21 691 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 ANGPTL8Q6UXH0 198 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 TECPR1Q7Z6L1 1165 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 LRRC28Q86X40 367 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 LILRA3Q8N6C8 439 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 RASGEF1AQ8N9B8 481 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 OR14A16Q8NHC5 309 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PHOSPHO1Q8TCT1 267 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 WFIKKN2Q8TEU8 576 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 SELENOMQ8WWX9 145 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 GLYATL1Q969I3 302 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 KXD1Q9BQD3 176 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 NFKBIL1Q9UBC1 381 aaPredicted RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 TESQ9UGI8 421 aaKnown RBP12.4□□□□□ -0.42
CLK3-206ENST00000562078 ACSL6Q9UKU0 697 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 CLEC4AQ9UMR7 237 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 CA5BQ9Y2D0 317 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
CLK3-206ENST00000562078 TRBV4-1A0A0J9YWV2 114 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 DISC1C4P0D8 188 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 WNT1P04628 370 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 OR12D1P0DN82 309 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 ZNF3P17036 446 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 XCR1P46094 333 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 SLC6A11P48066 632 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 DGCR2P98153 550 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 GUCA2BQ16661 112 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 ZNF425Q6IV72 752 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 ZNF613Q6PF04 617 aa12.39□□□□□ -0.43
CLK3-206ENST00000562078 GSG1LQ6UXU4 331 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms