RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 RNF122Q9H9V4 155 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 SSU72Q9NP77 194 aaKnown RBP22.7■■□□□ 1.22
NME3-202ENST00000561637 KCNK9Q9NPC2 374 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 ATAD3AQ9NVI7 634 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 PNPOQ9NVS9 261 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 CLEC4AQ9UMR7 237 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 AP4B1Q9Y6B7 739 aa22.7■■□□□ 1.22
NME3-202ENST00000561637 SCDO00767 359 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 LY6G6DO95868 133 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 C1QCP02747 245 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 CCKARP32238 428 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 EIF1AXP47813 144 aaKnown RBP22.69■■□□□ 1.22
NME3-202ENST00000561637 CASP9P55211 416 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 FBXW10Q5XX13 1052 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 CBLN3Q6UW01 205 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 LSRQ86X29 649 aaPredicted RBP22.69■■□□□ 1.22
NME3-202ENST00000561637 GTPBP8Q8N3Z3 284 aaPredicted RBP22.69■■□□□ 1.22
NME3-202ENST00000561637 ANKRD42Q8N9B4 389 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 SFXN5Q8TD22 340 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 ADGRG7Q96K78 797 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 OR7D2Q96RA2 312 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 NUF2Q9BZD4 464 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 ASIC5Q9NY37 505 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 NOP53Q9NZM5 478 aaKnown RBP22.69■■□□□ 1.22
NME3-202ENST00000561637 RAP2CQ9Y3L5 183 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 ZNF175Q9Y473 711 aa22.69■■□□□ 1.22
NME3-202ENST00000561637 SH3D21A4FU49 640 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 TM9SF1O15321 606 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 CGAP01215 116 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 DDX5P17844 614 aaKnown RBP22.68■■□□□ 1.22
NME3-202ENST00000561637 C21orf58P58505 322 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 PHC1P78364 1004 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 GUSBP1Q15486 140 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 LSM12Q3MHD2 195 aaKnown RBP22.68■■□□□ 1.22
NME3-202ENST00000561637 ANKRD46Q86W74 232 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 B4GALNT2Q8NHY0 566 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 PHOSPHO1Q8TCT1 267 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 ADAMTS15Q8TE58 950 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 PGM2Q96G03 612 aa22.68■■□□□ 1.22
NME3-202ENST00000561637 FAF1Q9UNN5 650 aaPredicted RBP22.68■■□□□ 1.22
NME3-202ENST00000561637 A0A0J9YW62 118 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 CENPVL1A0A0U1RR11 272 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 A0A1W2PQD3 144 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 NPIPB9F8W1W9 429 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 LINC01387J3KSC0 135 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 MSTNO14793 375 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 EFNA2O43921 213 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 CXCL13O43927 109 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 HPGDP15428 266 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 ZNF17P17021 662 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 EEFSECP57772 596 aaKnown RBP22.67■■□□□ 1.22
NME3-202ENST00000561637 BST1Q10588 318 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 FOXF1Q12946 379 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 TOMM34Q15785 309 aaPredicted RBP22.67■■□□□ 1.22
NME3-202ENST00000561637 OR2A2Q6IF42 318 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 HOMEZQ8IX15 550 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 OR10D3Q8NH80 312 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 PRPF18Q99633 342 aaKnown RBP22.67■■□□□ 1.22
NME3-202ENST00000561637 PAIP2Q9BPZ3 127 aaKnown RBP22.67■■□□□ 1.22
NME3-202ENST00000561637 NEUROD4Q9HD90 331 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 CARD8Q9Y2G2 431 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 TESMINQ9Y4I5 508 aa22.67■■□□□ 1.22
NME3-202ENST00000561637 FBN1P35555 2871 aaKnown RBP22.67■■□□□ 1.22
NME3-202ENST00000561637 A0A087WZY1 265 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 ESPNB1AK53 854 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 C9JVG2 144 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 TNFSF11O14788 317 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 SIAH2O43255 324 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 HRGP04196 525 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 CRHP06850 196 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 LINGO3P0C6S8 592 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 MYZAPP0CAP1 466 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 ATP6V1C1P21283 382 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 LCN1P31025 176 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 RPL14P50914 215 aaKnown RBP22.66■■□□□ 1.22
NME3-202ENST00000561637 ZNF41P51814 821 aaPredicted RBP22.66■■□□□ 1.22
NME3-202ENST00000561637 WDR4P57081 412 aaKnown RBP22.66■■□□□ 1.22
NME3-202ENST00000561637 NKX6-1P78426 367 aaPredicted RBP22.66■■□□□ 1.22
NME3-202ENST00000561637 SGCBQ16585 318 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 KLHL26Q53HC5 615 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 ZNF610Q8N9Z0 462 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 KLHL28Q9NXS3 571 aa22.66■■□□□ 1.22
NME3-202ENST00000561637 PRR14LQ5THK1 2151 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 ANKRD28O15084 1053 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 SCN2BO60939 215 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 CD53P19397 219 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 NME5P56597 212 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 RPS3AP61247 264 aaKnown RBP22.65■■□□□ 1.22
NME3-202ENST00000561637 MAD2L1Q13257 205 aaPredicted RBP22.65■■□□□ 1.22
NME3-202ENST00000561637 STX3Q13277 289 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 C22orf34Q6ZV56 151 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 C6orf120Q7Z4R8 191 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 CIARTQ8N365 385 aaPredicted RBP22.65■■□□□ 1.22
NME3-202ENST00000561637 ZNF614Q8N883 585 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 ACTRT2Q8TDY3 377 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 ZBTB8AQ96BR9 441 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 REPIN1Q9BWE0 567 aaKnown RBP22.65■■□□□ 1.22
NME3-202ENST00000561637 KCNE5Q9UJ90 142 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 HAO1Q9UJM8 370 aa22.65■■□□□ 1.22
NME3-202ENST00000561637 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms