RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 KERAO60938 352 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PRSS23O95084 383 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 SCELO95171 688 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PABPC4LP0CB38 370 aaKnown RBP4.61□□□□□ -1.67
HERC1-213ENST00000561359 NR2F6P10588 404 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 CD22P20273 847 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 NT5EP21589 574 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PIK3R1P27986 724 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 IL12BP29460 328 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PCGF2P35227 344 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PTPN7P35236 360 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 KRT20P35900 424 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 SERPINF1P36955 418 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 GDF5P43026 501 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 IDH3GP51553 393 aaPredicted RBP4.61□□□□□ -1.67
HERC1-213ENST00000561359 RAP1GDS1P52306 607 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 IL2P60568 153 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 DUSP2Q05923 314 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 BAMBIQ13145 260 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 RIN1Q13671 783 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 EFR3AQ14156 821 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 EXOSC7Q15024 291 aaKnown RBP4.61□□□□□ -1.67
HERC1-213ENST00000561359 BEAN1Q3B7T3 259 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 TMEM35AQ53FP2 167 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 PDSS1Q5T2R2 415 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 STEAP3Q658P3 488 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 HBMQ6B0K9 141 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 OR4C11Q6IEV9 310 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 C11orf87Q6NUJ2 197 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 AADACL2Q6P093 401 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 LARP4Q71RC2 724 aaKnown RBP eCLIP4.61□□□□□ -1.67
HERC1-213ENST00000561359 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 SPATA19Q7Z5L4 167 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 LUZP1Q86V48 1076 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 WDR75Q8IWA0 830 aaKnown RBP4.61□□□□□ -1.67
HERC1-213ENST00000561359 CELF2-AS1Q8N7Q2 184 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 FADS6Q8N9I5 356 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 SYT14Q8NB59 555 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 OR2M3Q8NG83 312 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 OR2V1Q8NHB1 315 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 WDR60Q8WVS4 1066 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 ATG4AQ8WYN0 398 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 OSTF1Q92882 214 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 TMIGD2Q96BF3 282 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 C1GALT1C1Q96EU7 318 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 NDNQ99608 321 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 EGFL8Q99944 293 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 WDR41Q9HAD4 459 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 SLC52A3Q9NQ40 469 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 TREM2Q9NZC2 230 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 KLHL13Q9P2N7 655 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 ZDHHC2Q9UIJ5 367 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 MCM8Q9UJA3 840 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 FBXL7Q9UJT9 491 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 MID2Q9UJV3 735 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 ZNF490Q9ULM2 529 aaPredicted RBP4.61□□□□□ -1.67
HERC1-213ENST00000561359 TRAF6Q9Y4K3 522 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 TENM2Q9NT68 2774 aa4.61□□□□□ -1.67
HERC1-213ENST00000561359 COL7A1Q02388 2944 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 HEATR1Q9H583 2144 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 A0A0G2JMP0 313 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 A0A0X1KG70 313 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ATP6V1G2-DDX39BF2Z307 99 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 LYNX1G3V0Z9 82 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 AP3B1O00203 1094 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ADAMDEC1O15204 470 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 GMFGO60234 142 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 EEDO75530 441 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 RAD51DO75771 328 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 HAUS5O94927 633 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 PGM3O95394 542 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 TFP02787 698 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 YES1P07947 543 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ENO2P09104 434 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 LYNX1P0DP58 116 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 GAAP10253 952 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SAGP10523 405 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 PCNAP12004 261 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ETS1P14921 441 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 S1PR1P21453 382 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 IGHV1-2P23083 117 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ME2P23368 584 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 STIP1P31948 543 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 EVI2BP34910 448 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CTNNA1P35221 906 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 SLC1A2P43004 574 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 PPICP45877 212 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 KHKP50053 298 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 GAS1P54826 345 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 RWDD2BP57060 319 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CARD18P57730 90 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ZP4Q12836 540 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 DHX34Q14147 1143 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 MORF4L2Q15014 288 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 RNPS1Q15287 305 aaKnown RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 STX1AQ16623 288 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 HIST2H2ACQ16777 129 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 ASTE1Q2TB18 679 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 GLYR1Q49A26 553 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 ZNF628Q5EBL2 1059 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms