RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	CASQ2	O14958	399 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	IGSF6	O95976	241 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	FOLR2	P14207	255 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	GATA1	P15976	413 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	PBLD	P30039	288 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	CCND2	P30279	289 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	HERVK_113	P63132	956 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	ERVK-8	P63133	956 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	BNIP1	Q12981	228 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	CRMP1	Q14194	572 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	ADPRM	Q3LIE5	342 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	LINC00242	Q5T6M2	205 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	HHAT	Q5VTY9	493 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	PNCK	Q6P2M8	343 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	LPCAT2	Q7L5N7	544 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	ERAS	Q7Z444	233 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	P4HA3	Q7Z4N8	544 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	CCDC65	Q8IXS2	484 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	FAM222B	Q8WU58	562 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	SLC5A11	Q8WWX8	675 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	ANKRD7	Q92527	254 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	PPP1R14B	Q96C90	147 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	ERVK-6	Q9BXR3	956 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	CCSER1	Q9C0I3	900 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	SPATA7	Q9P0W8	599 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	DHRS4-AS1	Q9P1J3	65 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	MBD2	Q9UBB5	411 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	TRPM7	Q96QT4	1865 aa		4.26	□□□□□ -1.73
TCF12-223	ENST00000561235	NPIPA5	A0A0B4J1W7	369 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235		A0A0U1RQV5	110 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	LRIT2	A6NDA9	550 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	TRABD2B	A6NFA1	517 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	ZNF487	B1APH4	448 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	NPIPA5	E9PKD4	350 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235		H0YL77	283 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	LANCL1	O43813	399 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	BBOX1	O75936	387 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	NUDT14	O95848	222 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CA3	P07451	260 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	WNT2	P09544	360 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	RRAS	P10301	218 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	GCFC2	P16383	781 aa	Known RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	GATA2	P23769	480 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	HTR5A	P47898	357 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	POU3F4	P49335	361 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	ARHGDIA	P52565	204 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	TPM4	P67936	248 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	PRKCE	Q02156	737 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	ZNF33B	Q06732	778 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	DPYS	Q14117	519 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CNPY1	Q3B7I2	92 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	LCE1F	Q5T754	118 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	SLC25A24	Q6NUK1	477 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	STOX1	Q6ZVD7	989 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	PAQR9	Q6ZVX9	377 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	TSEN54	Q7Z6J9	526 aa	Known RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	MYPOP	Q86VE0	399 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CCDC36	Q8IYA8	594 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CERS5	Q8N5B7	392 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	BCORP1	Q8N888	145 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	BEST4	Q8NFU0	473 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	OR2L2	Q8NH16	312 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CRYGN	Q8WXF5	182 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	LRRC45	Q96CN5	670 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	SLC25A36	Q96CQ1	311 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	VAT1L	Q9HCJ6	419 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	BATF3	Q9NR55	127 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CENPM	Q9NSP4	180 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	CIDEB	Q9UHD4	219 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	MGAT4B	Q9UQ53	548 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	RNF115	Q9Y4L5	304 aa		4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	KIAA0100	Q14667	2235 aa	Known RBP	4.25	□□□□□ -1.73
TCF12-223	ENST00000561235	NCAPD2	Q15021	1401 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	FAM230A	A0A1W2PPH8	454 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	RNF222	A6NCQ9	220 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	MFSD2B	A6NFX1	497 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235		E9PMD0	336 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235		F8WDY8	70 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	SGK494	L7N484	410 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	E2F3	O00716	465 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	SH3BGRL	O75368	114 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	SCGB2A1	O75556	95 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	TOX	O94900	526 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	NDUFA7	O95182	113 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	IGHV3-9	P01782	118 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	PDHB	P11177	359 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	ZNF24	P17028	368 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	BCL3	P20749	454 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	PAICS	P22234	425 aa	Known RBP	4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	HMGB2	P26583	209 aa	Known RBP	4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	BRCC3	P46736	316 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	PGF	P49763	221 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	MRPS6	P82932	125 aa	Known RBP	4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	TCTEX1D4	Q5JR98	221 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	CCDC183	Q5T5S1	534 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	RIPPLY2	Q5TAB7	128 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	CST9	Q5W186	159 aa		4.24	□□□□□ -1.73
TCF12-223	ENST00000561235	DMKN	Q6E0U4	476 aa	Predicted RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 84 ms