RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 RHCGQ9UBD6 479 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 ACAD8Q9UKU7 415 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 A4GNTQ9UNA3 340 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 MAGED1Q9Y5V3 778 aaPredicted RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 LYVE1Q9Y5Y7 322 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 SH3PXD2BA1X283 911 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 MASP2O00187 686 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 EI24O14681 340 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 OR2J2O76002 312 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 GADD45GO95257 159 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 RASAL1O95294 804 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 CSTAP01040 98 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 NGFRP08138 427 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 GKN3PP0CG01 181 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 PRG2P13727 222 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 ADH7P40394 386 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 ZNF136P52737 540 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 HMGA2P52926 109 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 AQP4P55087 323 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 APOFQ13790 326 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 EFR3AQ14156 821 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 CCDC92Q53HC0 331 aaPredicted RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 COLEC12Q5KU26 742 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 APOOLQ6UXV4 268 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 TSPYL5Q86VY4 417 aaPredicted RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 SLC15A4Q8N697 577 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 PIK3C3Q8NEB9 887 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 OR4C15Q8NGM1 316 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 OR52J3Q8NH60 311 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 SLC22A8Q8TCC7 542 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 NRBF2Q96F24 287 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 PRRC1Q96M27 445 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 MCHR1Q99705 422 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 BARD1Q99728 777 aaKnown RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 NMNAT1Q9HAN9 279 aaPredicted RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 DNAJB12Q9NXW2 375 aaKnown RBP10.31□□□□□ -0.76
USP3-218ENST00000560202 SLC35A3Q9Y2D2 325 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 CEP250Q9BV73 2442 aa10.31□□□□□ -0.76
USP3-218ENST00000560202 PTPRBP23467 1997 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 TRABD2BA6NFA1 517 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 SERPINA7P05543 415 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 H1F0P07305 194 aaKnown RBP10.3□□□□□ -0.76
USP3-218ENST00000560202 ITGAMP11215 1152 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 LIFP15018 202 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 FUT4P22083 530 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 PRKACGP22612 351 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 LIMS1P48059 325 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 SMIM11AP58511 58 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 TAS2R41P59536 307 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 Q0VFX4 171 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 ATP1A4Q13733 1029 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 DAG1Q14118 895 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 GK3PQ14409 553 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 CD226Q15762 336 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 EXOC3L2Q2M3D2 409 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 ENTPD8Q5MY95 495 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 Q6ZNX1 250 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 RANBP3LQ86VV4 465 aaPredicted RBP10.3□□□□□ -0.76
USP3-218ENST00000560202 MAGEE2Q8TD90 523 aaPredicted RBP10.3□□□□□ -0.76
USP3-218ENST00000560202 NR4A3Q92570 626 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 SLC35B4Q969S0 331 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 IP6K3Q96PC2 410 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 RASL10BQ96S79 203 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 FNDC11Q9BVV2 318 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 CTPS2Q9NRF8 586 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 RHBDL2Q9NX52 303 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 PDP1Q9P0J1 537 aaPredicted RBP10.3□□□□□ -0.76
USP3-218ENST00000560202 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
USP3-218ENST00000560202 PTPRZ1P23471 2315 aaPredicted RBP10.3□□□□□ -0.76
USP3-218ENST00000560202 CNOT1A5YKK6 2376 aaKnown RBP10.29□□□□□ -0.76
USP3-218ENST00000560202 A0A1W2PQD3 144 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 C7orf72A4D263 438 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 CPSF4LA6NMK7 179 aaKnown RBP10.29□□□□□ -0.76
USP3-218ENST00000560202 ALG1L2C9J202 215 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 H3BNH8 94 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FADS1O60427 444 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FMO6PO60774 539 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 ITGA10O75578 1167 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 IFNA8P32881 189 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 TMED10P49755 219 aaKnown RBP10.29□□□□□ -0.76
USP3-218ENST00000560202 ALDH3A2P51648 485 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FBXW4P57775 412 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 TUBA4AP68366 448 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FOXC1Q12948 553 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FOXD4Q12950 439 aaPredicted RBP10.29□□□□□ -0.76
USP3-218ENST00000560202 CHAF1BQ13112 559 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 NDUFAF6Q330K2 333 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 NADK2Q4G0N4 442 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 FCRLBQ6BAA4 426 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 PLEKHM3Q6ZWE6 761 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 ZNF550Q7Z398 422 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 NUP54Q7Z3B4 507 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 RPS19BP1Q86WX3 136 aaKnown RBP10.29□□□□□ -0.76
USP3-218ENST00000560202 OFCC1Q8IZS5 231 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 ARMC10Q8N2F6 343 aa10.29□□□□□ -0.76
USP3-218ENST00000560202 GATSQ8NAP1 163 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms