RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SNRPGP62308 76 aaKnown RBP11.68□□□□□ -0.54
USP3-213ENST00000559711 CDK5Q00535 292 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 PMS2P3Q13401 168 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 HLA-DQA1Q5Y7H0 255 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 FAAH2Q6GMR7 532 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 TMEM205Q6UW68 189 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 WDR88Q6ZMY6 472 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 SLCO6A1Q86UG4 719 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 KIF18BQ86Y91 864 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 ZNF440Q8IYI8 595 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 ZNF527Q8NB42 609 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 ZNF540Q8NDQ6 660 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 FAM71CQ8NEG0 241 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 B3GNT7Q8NFL0 401 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 TMEM239Q8WW34 195 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 METTL21AQ8WXB1 218 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 FAM46AQ96IP4 442 aaKnown RBP11.68□□□□□ -0.54
USP3-213ENST00000559711 GAL3ST4Q96RP7 486 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 WDR54Q9H977 334 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 AKIRIN1Q9H9L7 192 aaPredicted RBP11.68□□□□□ -0.54
USP3-213ENST00000559711 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 CCNB1IP1Q9NPC3 277 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 ZNF223Q9UK11 482 aaPredicted RBP11.68□□□□□ -0.54
USP3-213ENST00000559711 SPEGQ15772 3267 aa11.68□□□□□ -0.54
USP3-213ENST00000559711 A0A1B0GWA3 101 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SH3D21A4FU49 640 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 H3BSA7 217 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 CHP2O43745 196 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 TSPAN2O60636 221 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 FAM20BO75063 409 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 CBFA2T3O75081 653 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 UTS2O95399 124 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 ZNF28P17035 718 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 PCMT1P22061 227 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SLC5A2P31639 672 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 NR0B1P51843 470 aaKnown RBP11.67□□□□□ -0.54
USP3-213ENST00000559711 PIGFQ07326 219 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SF3A2Q15428 464 aaKnown RBP11.67□□□□□ -0.54
USP3-213ENST00000559711 PTCHD4Q6ZW05 846 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 GPR141Q7Z602 305 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 MRGPREQ86SM8 312 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SLC34A3Q8N130 599 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 APCDD1LQ8NCL9 501 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 TP53INP1Q96A56 240 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 MPP4Q96JB8 637 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 HS6ST2Q96MM7 605 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SIGLEC11Q96RL6 698 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 WDR77Q9BQA1 342 aaPredicted RBP11.67□□□□□ -0.54
USP3-213ENST00000559711 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 NRSN2Q9GZP1 204 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 SLC25A19Q9HC21 320 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
USP3-213ENST00000559711 C11orf16Q9NQ32 467 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 FKBP14Q9NWM8 211 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 CNIH4Q9P003 139 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 ERVK-18Q9QC07 812 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 PSORS1C1Q9UIG5 152 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 NXT1Q9UKK6 140 aaKnown RBP11.67□□□□□ -0.54
USP3-213ENST00000559711 SNX5Q9Y5X3 404 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 FER1L5A0AVI2 2057 aa11.67□□□□□ -0.54
USP3-213ENST00000559711 NUP210LQ5VU65 1888 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 KLK3P07288 261 aaPredicted RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 NGFRP08138 427 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 RBM34P42696 430 aaKnown RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 RNF4P78317 190 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 EFNB1P98172 346 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 PRKCDQ05655 676 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 GINS1Q14691 196 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 CNPY1Q3B7I2 92 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 TMEM201Q5SNT2 666 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 SLC25A30Q5SVS4 291 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 GTF2IRD2BQ6EKJ0 949 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 APOOLQ6UXV4 268 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 LINC00114Q6XXX2 140 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 ZNF517Q6ZMY9 492 aaPredicted RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 PRSS48Q7RTY5 328 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 GTF2IRD2Q86UP8 949 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 NAXDQ8IW45 347 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 CLDN22Q8N7P3 220 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 OR8J1Q8NGP2 316 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 WDR36Q8NI36 951 aaKnown RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 EXOSC3Q9NQT5 275 aaKnown RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 SLC39A1Q9NY26 324 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 IL20Q9NYY1 176 aa11.66□□□□□ -0.54
USP3-213ENST00000559711 AKAP7Q9P0M2 348 aaPredicted RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 COL5A1P20908 1838 aaPredicted RBP11.66□□□□□ -0.54
USP3-213ENST00000559711 FAM86C2PA6NEL3 165 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 CLCA1A8K7I4 914 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 M0R129 80 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 SCDO00767 359 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 RGS10O43665 173 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 PIP5K1CO60331 668 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 REM1O75628 298 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 HPGDP15428 266 aa11.65□□□□□ -0.54
USP3-213ENST00000559711 ITIH1P19827 911 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms