RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 UTP23Q9BRU9 249 aaKnown RBP15.44■□□□□ 0.06
SNX1-203ENST00000558040 OSBPL11Q9BXB4 747 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SEMA6AQ9H2E6 1030 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 A6NL46 340 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 HCRTR2O43614 444 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 BCAS1O75363 584 aaPredicted RBP15.43■□□□□ 0.06
SNX1-203ENST00000558040 E2F6O75461 281 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 PRSS23O95084 383 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 GKN3PP0CG01 181 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 RRM2P31350 389 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 CASP3P42574 277 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 YAP1P46937 504 aaKnown RBP15.43■□□□□ 0.06
SNX1-203ENST00000558040 CCR4P51679 360 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 ARHGDIAP52565 204 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 PLAURQ03405 335 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 TRIP10Q15642 601 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 COLEC12Q5KU26 742 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 ICA1LQ8NDH6 482 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 TOR1AIP2Q8NFQ8 470 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 PHF10Q8WUB8 498 aaKnown RBP15.43■□□□□ 0.06
SNX1-203ENST00000558040 SDCCAG3Q96C92 435 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 DCBLD2Q96PD2 775 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 WFDC6Q9BQY6 131 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 FNDC11Q9BVV2 318 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 TRIM2Q9C040 744 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 TMEM27Q9HBJ8 222 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 SH2D2AQ9NP31 389 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 PRDM4Q9UKN5 801 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 ACAD8Q9UKU7 415 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 CARD8Q9Y2G2 431 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 SAMHD1Q9Y3Z3 626 aaKnown RBP15.43■□□□□ 0.06
SNX1-203ENST00000558040 TESMINQ9Y4I5 508 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 WIF1Q9Y5W5 379 aa15.43■□□□□ 0.06
SNX1-203ENST00000558040 CPSF4LA6NMK7 179 aaKnown RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 J3KTA2 159 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 CASQ2O14958 399 aaPredicted RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 OR5F1O95221 314 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 GADD45GO95257 159 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 P04436 131 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 H1F0P07305 194 aaKnown RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 LINGO3P0C6S8 592 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 PRG2P13727 222 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 DNAJA1P31689 397 aaKnown RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 CCL11P51671 97 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 UCNP55089 124 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 CDH12P55289 794 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 SUMO3P55854 103 aaPredicted RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 COPZ1P61923 177 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 HOXC5Q00444 222 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 ZNF117Q03924 483 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 EPS8Q12929 822 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 MFAP5Q13361 173 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 GANABQ14697 944 aaKnown RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 NDUFAF6Q330K2 333 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 ENTPD8Q5MY95 495 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 LINC00696Q6ZRV3 163 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 ZNF605Q86T29 641 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 OFCC1Q8IZS5 231 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 SVOPLQ8N434 492 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 PIK3C3Q8NEB9 887 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 CATSPER1Q8NEC5 780 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 EME1Q96AY2 570 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 EPYCQ99645 322 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 RNF32Q9H0A6 362 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 CPNE5Q9HCH3 593 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 TIMMDC1Q9NPL8 285 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 SACM1LQ9NTJ5 587 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 PPP4R1LQ9P1A2 415 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 LRFN1Q9P244 771 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 CNOT11Q9UKZ1 510 aaKnown RBP15.42■□□□□ 0.06
SNX1-203ENST00000558040 A4GNTQ9UNA3 340 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 KCNMB2Q9Y691 235 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 WDFY3Q8IZQ1 3526 aa15.42■□□□□ 0.06
SNX1-203ENST00000558040 TRAPPC13A5PLN9 417 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ANKRD33BA6NCL7 494 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 TNFRSF11BO00300 401 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 FAAHO00519 579 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 SNX4O95219 450 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 CCL3P10147 92 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 THRBP10828 461 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ZNF23P17027 643 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 PGCP20142 388 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 FPR1P21462 350 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 MSX1P28360 303 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 RYKP34925 604 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 PTGDSP41222 190 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ACAA2P42765 397 aaKnown RBP15.41■□□□□ 0.06
SNX1-203ENST00000558040 P2RX1P51575 399 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 GAS1P54826 345 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ST3GAL3Q11203 375 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 PIN1Q13526 163 aaPredicted RBP15.41■□□□□ 0.06
SNX1-203ENST00000558040 RAPSNQ13702 412 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 TUBA3CQ13748 450 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 CBFBQ13951 182 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ZNF468Q5VIY5 522 aaPredicted RBP15.41■□□□□ 0.06
SNX1-203ENST00000558040 TUBA3EQ6PEY2 450 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ZNF613Q6PF04 617 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 ZDHHC13Q8IUH4 622 aa15.41■□□□□ 0.06
SNX1-203ENST00000558040 LSMEM1Q8N8F7 131 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms