RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SCML1Q9UN30 329 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PROCRQ9UNN8 238 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 IFT52Q9Y366 437 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PPRC1Q5VV67 1664 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SALL1Q9NSC2 1324 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FAM135BQ49AJ0 1406 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TRPM1Q7Z4N2 1603 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM120BA0PK00 339 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 C9orf170A2RU37 121 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 IFITM10A6NMD0 228 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF729A6NN14 1252 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 KRTAP16-1A8MUX0 517 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TLR4O00206 839 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NTN3O00634 580 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TOR1AO14656 332 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ITGB1BP1O14713 200 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ACOX3O15254 700 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CLOCKO15516 846 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AKR7A2O43488 359 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NME6O75414 186 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ATP5HO75947 161 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CXCL14O95715 111 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SFTPBP07988 381 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SP9P0CG40 484 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC35E2BP0CK96 405 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC35E2P0CK97 266 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PSMC3P17980 439 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EIF2S2P20042 333 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ACKR3P25106 362 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 IFNA8P32881 189 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FEN1P39748 380 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC1A1P43005 524 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 KCNJ3P48549 501 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 YWHAEP62258 255 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SPIBQ01892 262 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 C2orf54Q08AI8 447 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CALCOCO2Q13137 446 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CEACAM7Q14002 265 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 GK2Q14410 553 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TGFBIQ15582 683 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FAM83EQ2M2I3 478 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM44Q2T9K0 475 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 POM121L1PQ3SYA9 428 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MOGAT2Q3SYC2 334 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 YIF1BQ5BJH7 314 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ATF7IP2Q5U623 682 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PRAMEF20Q5VT98 475 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PRAMEF8Q5VWM4 474 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 BSPRYQ5W0U4 402 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ISLR2Q6UXK2 745 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TMCO2Q7Z6W1 182 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 YRDCQ86U90 279 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MMAAQ8IVH4 418 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MISPQ8IVT2 679 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AQP12AQ8IXF9 295 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZC3H3Q8IXZ2 948 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SYCE1Q8N0S2 351 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 KLHDC1Q8N7A1 406 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF781Q8N8C0 355 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CSNK1G2-AS1Q8NCQ2 148 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OR52E1Q8NGJ3 308 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OR8J1Q8NGP2 316 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ATP8B4Q8TF62 1192 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PDCD6IPQ8WUM4 868 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 DNAJA4Q8WW22 397 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 YIPF5Q969M3 257 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CHMP6Q96FZ7 201 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM80Q96HE8 168 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NSMCE2Q96MF7 247 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF578Q96N58 590 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 LGMNQ99538 433 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SEC22CQ9BRL7 303 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 BBS2Q9BXC9 721 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NDEL1Q9GZM8 345 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CARD9Q9H257 536 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CYP3A43Q9HB55 503 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FOLH1BQ9HBA9 442 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PIGVQ9NUD9 493 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TMOD2Q9NZR1 351 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 THYN1Q9P016 225 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SNX6Q9UNH7 406 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PLEKHA6Q9Y2H5 1048 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 DHRS7Q9Y394 339 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 COL2A1P02458 1487 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ANKRD36BQ8N2N9 1353 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC7Q96M83 1385 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 KIF14Q15058 1648 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SYNJ2O15056 1496 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NCOA2Q15596 1464 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 MBD5Q9P267 1494 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 NRXN1Q9ULB1 1477 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SIGLEC1Q9BZZ2 1709 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 RNF103-CHMP3A0A140T963 221 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 PQLC2LA1A4F0 135 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 C5orf51A6NDU8 294 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 K7EQG2 157 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 SOCS3O14543 225 aa1.42□□□□□ -2.18
HIF1A-212ENST00000557538 TRMUO75648 421 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms