RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ZNHIT1O43257 154 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 FCMRO60667 390 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 SYNGR4O95473 234 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 DBIP07108 87 aaKnown RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 RNF224P0DH78 156 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 IL7RP16871 459 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ELK4P28324 431 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ADSLP30566 484 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 HTR3AP46098 478 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 STARP49675 285 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 CRISP3P54108 245 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 CLDN18P56856 261 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 B3GALT5-AS1P59052 145 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 RPS26P62854 115 aaKnown RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 KCNJ10P78508 379 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 TMEM44Q2T9K0 475 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PLPPR5Q32ZL2 321 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 TIGD2Q4W5G0 525 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 AGKQ53H12 422 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PDZK1Q5T2W1 519 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PRAMEF8Q5VWM4 474 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PRAMEF7Q5VXH5 474 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ESPNLQ6ZVH7 1005 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ADGRE4PQ86SQ3 457 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GALNT10Q86SR1 603 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GRAMD2AQ8IUY3 354 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 CCDC71Q8IV32 467 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 MARVELD2Q8N4S9 558 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GATSQ8NAP1 163 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ZFP90Q8TF47 636 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ST8SIA1Q92185 356 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GTF2H4Q92759 462 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 RAB8BQ92930 207 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 OTUB1Q96FW1 271 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 SH3YL1Q96HL8 342 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 REXO5Q96IC2 774 aaKnown RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 EBF4Q9BQW3 602 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 INPP5KQ9BT40 448 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 SFXN3Q9BWM7 321 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 RTN4RQ9BZR6 473 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 PIGMQ9H3S5 423 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 FANCFQ9NPI8 374 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 EXOSC3Q9NQT5 275 aaKnown RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GLRX2Q9NS18 164 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 MED17Q9NVC6 651 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 FBXO34Q9NWN3 711 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ZNF446Q9NWS9 450 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 FLRT3Q9NZU0 649 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 LEF1Q9UJU2 399 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ICAM5Q9UMF0 924 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 CARD8Q9Y2G2 431 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 IFT52Q9Y366 437 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 NDUFAF1Q9Y375 327 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 ZNF175Q9Y473 711 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 SPIN1Q9Y657 262 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-222ENST00000557356 GMEB1Q9Y692 573 aa7.1□□□□□ -1.27
PSEN1-222ENST00000557356 MYO7BQ6PIF6 2116 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 A0A0G2JNJ9 132 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 A0A0G2JPF8 293 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 AGAP5A6NIR3 686 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 SLC22A20A6NK97 555 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 CLCA1A8K7I4 914 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 HNRNPCL2B2RXH8 293 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 HNRNPCL3B7ZW38 293 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 C5orf58C9J3I9 102 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 H3BML4 177 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 NR5A2O00482 541 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ANGPT2O15123 496 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ADAMDEC1O15204 470 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 KIAA0513O60268 411 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 HNRNPCL1O60812 293 aaKnown RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 UGT2B17O75795 530 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 TOXO94900 526 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 H6PDO95479 791 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 NPPAP01160 153 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 GSNP06396 782 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 LINGO3P0C6S8 592 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 HNRNPCL4P0DMR1 293 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 SSTR2P30874 369 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 MDH1P40925 334 aaKnown RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 APOBEC1P41238 236 aaKnown RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 PCYT1AP49585 367 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 CLK1P49759 484 aaKnown RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ASCL1P50553 236 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ARFIP2P53365 341 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 CLDN15P56746 228 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 CARD18P57730 90 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 DSTNP60981 165 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ZNF117Q03924 483 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 LARS2Q15031 903 aaKnown RBP7.09□□□□□ -1.27
PSEN1-222ENST00000557356 RGNQ15493 299 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 MAPRE2Q15555 327 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 SLC25A53Q5H9E4 307 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 LRIF1Q5T3J3 769 aa7.09□□□□□ -1.27
PSEN1-222ENST00000557356 ARSKQ6UWY0 536 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms