RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 ACTRT2Q8TDY3 377 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 SH3YL1Q96HL8 342 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 TSSK3Q96PN8 268 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 CCT7Q99832 543 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 GATA5Q9BWX5 397 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 TMEM185BQ9H7F4 350 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 C3orf14Q9HBI5 128 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 GIMAP2Q9UG22 337 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 MRTO4Q9UKD2 239 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 DNAJC15Q9Y5T4 150 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 FREM1Q5H8C1 2179 aa9.96□□□□□ -0.82
HNRNPC-231ENST00000557336 A6NJY4 79 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 TMEM233B4DJY2 109 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 SLC28A1O00337 649 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 TNFSF11O14788 317 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 AZIN1O14977 448 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 WIPF1O43516 503 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 GCM2O75603 506 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 SOX30O94993 753 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 CNOT4O95628 575 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 LINC00032P0C843 101 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 BCKDHAP12694 445 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PSMB1P20618 241 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PCSK6P29122 969 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 AGTR1P30556 359 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ARRB2P32121 409 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PCLAFQ15004 111 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 CCDC153Q494R4 210 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 BEX5Q5H9J7 111 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 KANK2Q63ZY3 851 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 CBLN3Q6UW01 205 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PLEKHM3Q6ZWE6 761 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 NUFIP2Q7Z417 695 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ATG4DQ86TL0 474 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 TDRPQ86YL5 185 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 C10orf107Q8IVU9 208 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 WDR75Q8IWA0 830 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 GABRG1Q8N1C3 465 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 RAB3IL1Q8TBN0 382 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ROBO4Q8WZ75 1007 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 OSTF1Q92882 214 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ZBTB8AQ96BR9 441 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PPCDCQ96CD2 204 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 FAM120BQ96EK7 910 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 PLPPR2Q96GM1 343 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 MS4A4EQ96PG1 132 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 RHOXF2Q9BQY4 288 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 BDH2Q9BUT1 245 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 SRXN1Q9BYN0 137 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ACSS1Q9NUB1 689 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 ING1Q9UK53 422 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 EMC9Q9Y3B6 208 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 KCNE3Q9Y6H6 103 aa9.95□□□□□ -0.82
HNRNPC-231ENST00000557336 A0A1W2PQD3 144 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 FAM171A2A8MVW0 826 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 INAFM1C9JVW0 142 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 NPIPB9F8W1W9 429 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 HMGN2P05204 90 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 CHRNGP07510 517 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 PPP3CBP16298 524 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 MANFP55145 182 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 NAA20P61599 178 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ZNF117Q03924 483 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 TSC22D1Q15714 1073 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 TOMM34Q15785 309 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ZNF239Q16600 458 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 VPS26BQ4G0F5 336 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 KLHL26Q53HC5 615 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 CFAP157Q5JU67 520 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 LIPMQ5VYY2 423 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 HBMQ6B0K9 141 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 PPP4R4Q6NUP7 873 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ESPNLQ6ZVH7 1005 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 TRABD2AQ86V40 505 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 LILRA2Q8N149 483 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ZNF611Q8N823 705 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 OR6Y1Q8NGX8 325 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 RNF128Q8TEB7 428 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ABHD3Q8WU67 409 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 NANOS1Q8WY41 292 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ZBED6CLQ96FA7 236 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 PRRG4Q9BZD6 226 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ACTR6Q9GZN1 396 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 UBQLN4Q9NRR5 601 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 SH3BP4Q9P0V3 963 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ATP6V1HQ9UI12 483 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 ICAM5Q9UMF0 924 aa9.94□□□□□ -0.82
HNRNPC-231ENST00000557336 SVEP1Q4LDE5 3571 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 ABCA1O95477 2261 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 NPIPA5A0A0B4J1W7 369 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 ZNF814B7Z6K7 855 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 NPIPA7E9PJI5 369 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 OVOL3O00110 214 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 HS3ST1O14792 307 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 RGS14O43566 566 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 CRCPO75575 148 aa9.93□□□□□ -0.82
HNRNPC-231ENST00000557336 PLGP00747 810 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms