RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 VWA8A3KMH1 1905 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 A0A1B0GVT2 93 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SH2D7A6NKC9 451 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 OR6C75A6NL08 312 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MAGEB17A8MXT2 336 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 CCRL2O00421 344 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FPGTO14772 594 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TAPBPO15533 448 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ARHGEF9O43307 516 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 OR1I1O60431 355 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ACSL4O60488 711 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TMCC2O75069 709 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 STK16O75716 305 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MFN2O95140 757 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 IFNA14P01570 189 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 IL1AP01583 271 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 YES1P07947 543 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SRPRAP08240 638 aaKnown RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZDHHC11BP0C7U3 371 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PIRTP0C851 137 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PIPP12273 146 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ARSBP15848 533 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GPX2P18283 190 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ABCD3P28288 659 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PTPN6P29350 595 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PCGF2P35227 344 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 HNF1BP35680 557 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GGT5P36269 586 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 RAD52P43351 418 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 RFX2P48378 723 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SLC11A1P49279 550 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 RGS6P49758 472 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 CASP6P55212 293 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GNG2P59768 71 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 HMGCS1Q01581 520 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 RUNX1T1Q06455 604 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SMARCB1Q12824 385 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF177Q13360 481 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TDGQ13569 410 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 IRF3Q14653 427 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 BAK1Q16611 211 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SYT16Q17RD7 645 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GPR33Q49SQ1 333 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GTDC1Q4AE62 458 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FBXO48Q5FWF7 155 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 C10orf120Q5SQS8 335 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ATAD3CQ5T2N8 411 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ARMC4Q5T2S8 1044 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 C6orf183Q5T699 404 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ANXA8L1Q5VT79 327 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MEDAGQ5VYS4 303 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 LRRC66Q68CR7 880 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 NADSYN1Q6IA69 706 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 HEPHL1Q6MZM0 1159 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 KIAA1161Q6NSJ0 714 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 DOK6Q6PKX4 331 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GDPD3Q7L5L3 318 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PIANPQ8IYJ0 282 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 UBQLNLQ8IYU4 475 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FBXL14Q8N1E6 418 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GHDCQ8N2G8 530 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZBTB2Q8N680 514 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 KRTCAP2Q8N6L1 136 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ATAD1Q8NBU5 361 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 OR7G1Q8NGA0 311 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 OR9Q1Q8NGQ5 310 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 OR6F1Q8NGZ6 308 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SELENOMQ8WWX9 145 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 GGHQ92820 318 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 DNASE1L2Q92874 299 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 RPL3LQ92901 407 aaKnown RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ESAMQ96AP7 390 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 KIAA1143Q96AT1 154 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 PYCR2Q96C36 320 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 B3GALT6Q96L58 329 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FCRL1Q96LA6 429 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 Q96MT0 163 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 WDFY2Q96P53 400 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TRNT1Q96Q11 434 aaKnown RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MAPKAP1Q9BPZ7 522 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 CLSTN3Q9BQT9 956 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 FUZQ9BT04 418 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 TRAF4Q9BUZ4 470 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-246ENST00000557030 CDCA4Q9BXL8 241 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SLC22A4Q9H015 551 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SLC32A1Q9H598 525 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ELOVL6Q9H5J4 265 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MARCH7Q9H992 704 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ZFP14Q9HCL3 533 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 ASAH2Q9NR71 780 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 MARCH5Q9NX47 278 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 IMPAD1Q9NX62 359 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 NLKQ9UBE8 527 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 AASSQ9UDR5 926 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 SLCO3A1Q9UIG8 710 aa4.37□□□□□ -1.71
ATXN3-246ENST00000557030 BTNL2Q9UIR0 455 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms