RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR5B2Q96R09 309 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 CCT8L2Q96SF2 557 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 CCT7Q99832 543 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 TSSK1BQ9BXA7 367 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 AIPL1Q9NZN9 384 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 C6orf203Q9P0P8 240 aaPredicted RBP4.13□□□□□ -1.75
VRK1-205ENST00000555402 OARD1Q9Y530 152 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 KDRP35968 1356 aa4.13□□□□□ -1.75
VRK1-205ENST00000555402 A0A087WWV3 80 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 METTL21EPA6NDL7 271 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 H3BMQ9 156 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 SLC17A2O00624 439 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 GPAA1O43292 621 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 N4BP1O75113 896 aaKnown RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 LRATO95237 230 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 PGCP20142 388 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 TPSB2P20231 275 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 SERPINA2P20848 420 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 XCR1P46094 333 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 AP3M2P53677 418 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 VLDLRP98155 873 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 CSTF1Q05048 431 aaKnown RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 IL24Q13007 206 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 CHIT1Q13231 466 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 MXD4Q14582 209 aaPredicted RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 TGIF1Q15583 401 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 TPSAB1Q15661 275 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 NDUFA9Q16795 377 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 C16orf62Q7Z3J2 963 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 MTURNQ8N3F0 131 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 OR9A4Q8NGU2 314 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 N4BP2L2Q92802 583 aaPredicted RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 SH3YL1Q96HL8 342 aaPredicted RBP4.12□□□□□ -1.75
VRK1-205ENST00000555402 EDEM2Q9BV94 578 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 VCX2Q9H322 139 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 MIEF1Q9NQG6 463 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 EXTL2Q9UBQ6 330 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 RPH3ALQ9UNE2 315 aa4.12□□□□□ -1.75
VRK1-205ENST00000555402 SYNJ2BP-COX16A0A087WUM0 186 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 MSH4O15457 936 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 ZNF354AO60765 605 aaPredicted RBP4.11□□□□□ -1.75
VRK1-205ENST00000555402 CA1P00915 261 aaPredicted RBP4.11□□□□□ -1.75
VRK1-205ENST00000555402 TPM2P07951 284 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 CD55P08174 381 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 ALOX5P09917 674 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 BCL3P20749 454 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 SLC25A1P53007 311 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 CD47Q08722 323 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 RIPPLY1Q0D2K3 151 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 SLC5A12Q1EHB4 618 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 QRICH1Q2TAL8 776 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 MAJINQ3KP22 176 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 FAM120AOSQ5T036 256 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 SPATA46Q5T0L3 261 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 CENPPQ6IPU0 288 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 FAHD2BQ6P2I3 314 aaPredicted RBP4.11□□□□□ -1.75
VRK1-205ENST00000555402 C2orf66Q6UXQ4 117 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 SYT10Q6XYQ8 523 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 FAM3CQ92520 227 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 FAHD2AQ96GK7 314 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 C7orf34Q96L11 122 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 RANBP9Q96S59 729 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 SLC7A10Q9NS82 523 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 RABL2BQ9UNT1 228 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 L3MBTL1Q9Y468 752 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 PPIAL4AQ9Y536 164 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 MAB21L2Q9Y586 359 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 FRMPD4Q14CM0 1322 aa4.11□□□□□ -1.75
VRK1-205ENST00000555402 A0A1W2PNV4 684 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 NPIPA7E9PJI5 369 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 ARPC3O15145 178 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 NPIPA8P0DM63 369 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 ZNF44P15621 663 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 IGHV1-2P23083 117 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 IL2RGP31785 369 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PTGER3P43115 390 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 TDO2P48775 406 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 ERVPABLB-1P60509 514 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 ASAH1Q13510 395 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 LAGE3Q14657 143 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 MESDQ14696 234 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PDK3Q15120 406 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 C15orf32Q32M92 178 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 CEP55Q53EZ4 464 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 MARC1Q5VT66 337 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 C9orf40Q8IXQ3 194 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 UBQLNLQ8IYU4 475 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 TMEM123Q8N131 208 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.1□□□□□ -1.75
VRK1-205ENST00000555402 FAM133AQ8N9E0 248 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 ZNF606Q8WXB4 792 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PSMG2Q969U7 264 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 C1orf147Q96MC9 270 aaPredicted RBP4.1□□□□□ -1.75
VRK1-205ENST00000555402 AMDHD1Q96NU7 426 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PPDPFQ9H3Y8 114 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 LRRC40Q9H9A6 602 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 RAB18Q9NP72 206 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms