RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 WDPCPO95876 746 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 GNB3P16520 340 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF26P17031 533 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 NTSR1P30989 418 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MGAT3Q09327 533 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 C1orf61Q13536 156 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 RSU1Q15404 277 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TMPPEQ6ZT21 453 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TPRA1Q86W33 373 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 BEST4Q8NFU0 473 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MR1Q95460 341 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 OLAHQ9NV23 265 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MYH1P12882 1939 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ACOT8O14734 319 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 AP1G1O43747 822 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 CYBAP13498 195 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 SGSHP51688 502 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TDGQ13569 410 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MEPCEQ7L2J0 689 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 SYNPRQ8TBG9 265 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 GIMAP5Q96F15 307 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 FAM86C1Q9NVL1 165 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TXNL1O43396 289 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 FRS3O43559 492 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ARAFP10398 606 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MSR1P21757 451 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 GABRB3P28472 473 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 THBS2P35442 1172 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 POLR2HP52434 150 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 CSNK2A1P68400 391 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 CSNK2A3Q8NEV1 391 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 OR2M2Q96R28 347 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 PTTG3PQ9NZH4 202 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 NPAP1Q9NZP6 1156 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 RASD1Q9Y272 281 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF888P0CJ79 500 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 CTSAP10619 480 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MALLQ13021 153 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TATDN3Q17R31 274 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 DNTTIP1Q9H147 329 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 OR52D1Q9H346 318 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 MDFIC2A0A1B0GVS7 189 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 A6NIZ1 184 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF736B4DX44 427 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 MAOAP21397 527 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 RAP1BP61224 184 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 RAP1AP62834 184 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 EIF2B1Q14232 305 aaKnown RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 THAP3Q8WTV1 239 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ISL2Q96A47 359 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF583Q96ND8 569 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 MYADMQ96S97 322 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF436Q9C0F3 470 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF334Q9HCZ1 680 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 C5P01031 1676 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 LOC102723532A0A0G2JNH3 316 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 UBL4AP11441 157 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 HHEXQ03014 270 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 LRRC56Q8IYG6 542 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 CCDC71LQ8N9Z2 235 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 RCBTB1Q8NDN9 531 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 SDR9C7Q8NEX9 313 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 DTD2Q96FN9 168 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 CWH43Q9H720 699 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 ACSS1Q9NUB1 689 aaPredicted RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 KLK4Q9Y5K2 254 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 CIB4A0PJX0 185 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 A8MVJ9 347 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 SULT1C2O00338 296 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 MEF2DQ14814 521 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 PTRH1Q86Y79 214 aaKnown RBP13.11□□□□□ -0.31
VTI1B-204ENST00000554659 UEVLDQ8IX04 471 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 UBTD2Q8WUN7 234 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 C4orf36Q96KX1 117 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 V9GY05 133 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms