RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TRIOBPQ9H2D6 2365 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 UNC80Q8N2C7 3258 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 CUL9Q8IWT3 2517 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 PINLYPA6NC86 204 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 MEI4A8MW99 385 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 CFLARO15519 480 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 GMFGO60234 142 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 SMPD2O60906 423 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 BBOX1O75936 387 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 HIST1H2AGP0C0S8 130 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 TPBGLP0DKB5 382 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 CALCBP10092 127 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 NCF1P14598 390 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 GNSP15586 552 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 ACP1P24666 158 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 IFNAR2P48551 515 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 PITPNBP48739 271 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 ASAH1Q13510 395 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 CMPK2Q5EBM0 449 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 LDLRAP1Q5SW96 308 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 IL23RQ5VWK5 629 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 HIST2H2AA3Q6FI13 130 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 RTL6Q6ICC9 239 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 Q7L0L9 218 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 WDR49Q8IV35 697 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 MISPQ8IVT2 679 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 DENND6BQ8NEG7 585 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 OR52E1Q8NGJ3 308 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 OR6M1Q8NGM8 313 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 TFB1MQ8WVM0 346 aaKnown RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 SELENOMQ8WWX9 145 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 HIST1H2ACQ93077 130 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 ELSPBP1Q96BH3 223 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 PINX1Q96BK5 328 aaKnown RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 TRIM44Q96DX7 344 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 CXorf58Q96LI9 332 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 AGPAT1Q99943 283 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 TPPP3Q9BW30 176 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 GANQ9H2C0 597 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 GDF3Q9NR23 364 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 SLC35D1Q9NTN3 355 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 VPS54Q9P1Q0 977 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 NUDCQ9Y266 331 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 ATG4BQ9Y4P1 393 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 DDX49Q9Y6V7 483 aaKnown RBP2.6□□□□□ -1.99
SCFD1-210ENST00000553693 U3KQV3 271 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 ABCC4O15439 1325 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 MAP3K15Q6ZN16 1313 aa2.6□□□□□ -1.99
SCFD1-210ENST00000553693 DUOX1Q9NRD9 1551 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ERVV-1B6SEH8 477 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 H0YCG3 227 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 K7EPI3 171 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 LGALS8O00214 317 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 NME2P1O60361 137 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 SYNGR4O95473 234 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 DIRAS3O95661 229 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 AK1P00568 194 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 GSTA1P08263 222 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 NUDT17P0C025 328 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MBL2P11226 248 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 NR2C1P13056 603 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 RPS12P25398 132 aaKnown RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 RPA1P27694 616 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MAGEA4P43358 317 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ACADSBP45954 432 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 TRPC1P48995 793 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 CDKL1Q00532 357 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MYBPC1Q00872 1141 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 CEBPEQ15744 281 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 WSCD2Q2TBF2 565 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ANKDD1AQ495B1 522 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 GPAT3Q53EU6 434 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 LRRC23Q53EV4 343 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MPPE1Q53F39 396 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 RIPPLY2Q5TAB7 128 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 NKAIN2Q5VXU1 208 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 GALNT17Q6IS24 598 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 RHBDD2Q6NTF9 364 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 TIFABQ6ZNK6 161 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ITIH5Q86UX2 942 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 DEFB123Q8N688 67 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 TRPV3Q8NET8 790 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 OR56B1Q8NGI3 324 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 UBTD2Q8WUN7 234 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 GLYATL1Q969I3 302 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 TSGA13Q96PP4 275 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 COQ7Q99807 217 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 FUNDC2Q9BWH2 189 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF416Q9BWM5 594 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 CXXC4Q9H2H0 198 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ISG20L2Q9H9L3 353 aaKnown RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 VAT1LQ9HCJ6 419 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 KCNMB3Q9NPA1 279 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 HPS4Q9NQG7 708 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 FAM212BQ9NTI7 297 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 SOHLH2Q9NX45 425 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 TMOD2Q9NZR1 351 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms