RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MAP3K8P41279 467 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TMED10P49755 219 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 GPR143P51810 404 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 RRADP55042 308 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CASP9P55211 416 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SLC26A5P58743 744 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PSG6Q00889 435 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 EEF1A2Q05639 463 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SLC34A1Q06495 639 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DUSP8Q13202 625 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CCNIQ14094 377 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 EFR3AQ14156 821 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 GK3PQ14409 553 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SNCBQ16143 134 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SYPL1Q16563 259 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DUSP5Q16690 384 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 BTBD16Q32M84 506 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 LRRC23Q53EV4 343 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 IFI44LQ53G44 452 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 EIPR1Q53HC9 387 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CYBRD1Q53TN4 286 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF311Q5JNZ3 666 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DCST2Q5T1A1 773 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 LCN10Q6JVE6 187 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TEPPQ6URK8 271 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FAM198BQ6UWH4 519 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SHISA6Q6ZSJ9 500 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 LANCL3Q6ZV70 420 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TIPARPQ7Z3E1 657 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CYP4Z1Q86W10 505 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF440Q8IYI8 595 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DND1Q8IYX4 353 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF619Q8N2I2 560 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PAPD5Q8NDF8 572 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 NFAM1Q8NET5 270 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 OR5D16Q8NGK9 328 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 C16orf52Q8NHV5 167 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FBXO30Q8TB52 745 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FAM110BQ8TC76 370 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SLC22A8Q8TCC7 542 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CT55Q8WUE5 264 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SNRNP27Q8WVK2 155 aaKnown RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CANT1Q8WVQ1 401 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CDS1Q92903 461 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 MAL2Q969L2 176 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 NXPE2Q96DL1 559 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DTNBP1Q96EV8 351 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SLC47A1Q96FL8 570 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TPD52L3Q96J77 140 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FER1L6-AS2Q96M78 137 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 VSTM2LQ96N03 204 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SEPHS2Q99611 448 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 NUDT9Q9BW91 350 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PINK1Q9BXM7 581 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 TRIM8Q9BZR9 551 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 VCXQ9H320 206 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 AKIRIN1Q9H9L7 192 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 GPN2Q9H9Y4 310 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 RNPEPL1Q9HAU8 725 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 BARX1Q9HBU1 254 aaPredicted RBP4.62□□□□□ -1.67
VTI1B-202ENST00000553619 C8orf4Q9NR00 106 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SDHAF3Q9NRP4 125 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 DLL3Q9NYJ7 618 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 FOXJ2Q9P0K8 574 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 ABI3Q9P2A4 366 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 SLC9A8Q9Y2E8 581 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 NEUROG3Q9Y4Z2 214 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 GPR179Q6PRD1 2367 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 CACNA1AO00555 2505 aa4.62□□□□□ -1.67
VTI1B-202ENST00000553619 PTPRZ1P23471 2315 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IGHV1-45A0A0A0MS14 117 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TRAV20A0A0B4J274 112 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 LOC101059948A0A1B0GTJ6 334 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 A0A1W2PQ72 361 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FAM149AA5PLN7 773 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TRABD2BA6NFA1 517 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 A8MUI8 341 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 H0Y3Z8 333 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 GTPBP1O00178 669 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SYT5O00445 386 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SCDO00767 359 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 AP3D1O14617 1153 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TP53I11O14683 189 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 AKAP8O43823 692 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CNOT3O75175 753 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 KRT36O76013 467 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PRKD3O94806 890 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 KCNK2O95069 426 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 MFN2O95140 757 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IL33O95760 270 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 LGI1O95970 557 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CST1P01037 141 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 LDLRP01130 860 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IFNW1P05000 195 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FABP3P05413 133 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FESP07332 822 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 UMODP07911 640 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CT45A8P0DMV1 189 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CT45A9P0DMV2 189 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms