RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 DKK1O94907 266 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 HPGDP15428 266 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 GSTM3P21266 225 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 MMP11P24347 488 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 ABCD3P28288 659 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 EPHA2P29317 976 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 CRISP1P54107 249 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 IL5RAQ01344 420 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 ALDH6A1Q02252 535 aaKnown RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 CD47Q08722 323 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 TOP3AQ13472 1001 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 APOFQ13790 326 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 RBM48Q5RL73 367 aaKnown RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 MBOAT2Q6ZWT7 520 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 ZER1Q7Z7L7 766 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 APLFQ8IW19 511 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 LSMEM1Q8N8F7 131 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 PRSS27Q9BQR3 290 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 ZNF700Q9H0M5 742 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 POLR1BQ9H9Y6 1135 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
CACNB3-223ENST00000552480 PADI1Q9ULC6 663 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 PCDHGA6Q9Y5G7 932 aa11.67□□□□□ -0.54
CACNB3-223ENST00000552480 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 A0A0B4J2E0 115 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 A0A1B0GX12 115 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-223ENST00000552480 A0A1W2PQ72 361 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 ZAR1LA6NP61 321 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CHP2O43745 196 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 ZFAND5O76080 213 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 UBL4AP11441 157 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CHMP24386 653 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 ELK4P28324 431 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 OMPP47874 163 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 GSSP48637 474 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 EFR3AQ14156 821 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CD226Q15762 336 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 MEP1AQ16819 746 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CTU2Q2VPK5 515 aaKnown RBP11.66□□□□□ -0.54
CACNB3-223ENST00000552480 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 TMEM164Q5U3C3 297 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 RRM2BQ7LG56 351 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 TIPARPQ7Z3E1 657 aaKnown RBP11.66□□□□□ -0.54
CACNB3-223ENST00000552480 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CCDC71Q8IV32 467 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-223ENST00000552480 RNF113BQ8IZP6 322 aaKnown RBP11.66□□□□□ -0.54
CACNB3-223ENST00000552480 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 CT55Q8WUE5 264 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 TMEM255BQ8WV15 326 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 HS6ST2Q96MM7 605 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 MUC3AQ02505 3323 aa11.66□□□□□ -0.54
CACNB3-223ENST00000552480 A0A1B0GWA3 101 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 OR6C70A6NIJ9 312 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 TMEM200CA6NKL6 621 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ALG1L2C9J202 215 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 GTPBP1O00178 669 aaKnown RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ADAM11O75078 769 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 PPM1BO75688 479 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 NADKO95544 446 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 TP53P04637 393 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 COX6A1P12074 109 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 NAGAP17050 411 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ENDOUP21128 410 aaKnown RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 FPR3P25089 353 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 STAT5AP42229 794 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 LIMK1P53667 647 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 TSPAN31Q12999 210 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 SKP2Q13309 424 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 CDK5R2Q13319 367 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 MAD2L1BPQ15013 274 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 EXT1Q16394 746 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 NDUFAF6Q330K2 333 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 FAM69BQ5VUD6 431 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 LAIR2Q6ISS4 152 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 APOOLQ6UXV4 268 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 Q6ZPB1 254 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 CACTIN-AS1Q8N1I8 211 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 DEPDC4Q8N2C3 294 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ESX1Q8N693 406 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 POGLUT1Q8NBL1 392 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 FAM81AQ8TBF8 368 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 M1APQ8TC57 530 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 PHOSPHO1Q8TCT1 267 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ELP5Q8TE02 316 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 GRHL3Q8TE85 626 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 TMEM239Q8WW34 195 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 ZNF566Q969W8 418 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 MPP4Q96JB8 637 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 B3GNT4Q9C0J1 378 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 LAT2Q9GZY6 243 aa11.65□□□□□ -0.54
CACNB3-223ENST00000552480 LIN28AQ9H9Z2 209 aaKnown RBP11.65□□□□□ -0.54
CACNB3-223ENST00000552480 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms