RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 VSTM2LQ96N03 204 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 BTBD9Q96Q07 612 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 ARPC5LQ9BPX5 153 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 SOX7Q9BT81 388 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 NAT9Q9BTE0 207 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 LRRC1Q9BTT6 524 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 CAB39LQ9H9S4 337 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 PFDN4Q9NQP4 134 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 TMEFF2Q9UIK5 374 aaPredicted RBP4.73□□□□□ -1.65
HOXB3-213ENST00000552000 CES1P1Q9UKY3 287 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 VDAC3Q9Y277 283 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 MTO1Q9Y2Z2 717 aaKnown RBP4.73□□□□□ -1.65
HOXB3-213ENST00000552000 OR10H1Q9Y4A9 318 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 PCDHA9Q9Y5H5 950 aa4.73□□□□□ -1.65
HOXB3-213ENST00000552000 A0A0A6YYJ9 748 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 LRP5LA4QPB2 252 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SUPT3HB4E1H0 165 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ZNF814B7Z6K7 855 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 FAM157AC9JC47 383 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SLCO1B7G3V0H7 640 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 UBXN8O00124 270 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SMAD9O15198 467 aaKnown RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ADAMDEC1O15204 470 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 FBXO24O75426 580 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SUPT3HO75486 399 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 PIAS1O75925 651 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 WISP3O95389 354 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 DHRS4L1P0CG22 281 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ZNF23P17027 643 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ALDH9A1P49189 494 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ZNF83P51522 516 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 MAPK12P53778 367 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ATP6V0D1P61421 351 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 CHRNB3Q05901 458 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 MGAT5Q09328 741 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ZNF155Q12901 538 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 CUL3Q13618 768 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ERCC6LQ2NKX8 1250 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 TMEM44Q2T9K0 475 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 PRR31Q5SQ13 230 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 CCNYL2Q5T2Q4 361 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 STEAP4Q687X5 459 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 GTF2IRD2BQ6EKJ0 949 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SLC48A1Q6P1K1 146 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 CCDC137Q6PK04 289 aaKnown RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 GTF2IRD2Q86UP8 949 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 WDR20Q8TBZ3 569 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 UBTD2Q8WUN7 234 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 OSTF1Q92882 214 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 CNRIP1Q96F85 164 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 REXO5Q96IC2 774 aaKnown RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 RADILQ96JH8 1075 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SERPINI1Q99574 410 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 NPAS1Q99742 590 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 TRMOQ9BU70 441 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 MRPL1Q9BYD6 325 aaKnown RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 TMPRSS5Q9H3S3 457 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 TSPY26PQ9H489 355 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 RHOJQ9H4E5 214 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ALG9Q9H6U8 611 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 METTL17Q9H7H0 456 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 POPDC3Q9HBV1 291 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SAYSD1Q9NPB0 183 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SDHAF3Q9NRP4 125 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 PAQR5Q9NXK6 330 aaPredicted RBP4.72□□□□□ -1.65
HOXB3-213ENST00000552000 NUDT4Q9NZJ9 180 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 SLAMF8Q9P0V8 285 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 KLHL13Q9P2N7 655 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ABCG2Q9UNQ0 655 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 RNF11Q9Y3C5 154 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 TSC22D4Q9Y3Q8 395 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ANGPTL3Q9Y5C1 460 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 PCDHGB1Q9Y5G3 927 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 ATP23Q9Y6H3 246 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 PMF1-BGLAPU3KQ54 211 aa4.72□□□□□ -1.65
HOXB3-213ENST00000552000 NPIPA5A0A0B4J1W7 369 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 A0A1W2PR80 420 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 C1orf226A1L170 272 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 C9JVG2 144 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 NPIPA7E9PJI5 369 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 H0YIV9 168 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 H3BS24 57 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 NDUFS8O00217 210 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 FOXE1O00358 373 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 DNALI1O14645 258 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PSPNO60542 156 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 BCAS2O75934 225 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 SEMA3DO95025 777 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 PABPC4LP0CB38 370 aaKnown RBP4.71□□□□□ -1.66
HOXB3-213ENST00000552000 CTAGE8P0CG41 777 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 NPIPA8P0DM63 369 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF17P17021 662 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 GGT1P19440 569 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 ME2P23368 584 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 EDNRAP25101 427 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 CD40P25942 277 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 SHC1P29353 583 aa4.71□□□□□ -1.66
HOXB3-213ENST00000552000 IL2RGP31785 369 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms