RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 NUDT1P36639 197 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 NDST1P52848 882 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 PGGT1BP53609 377 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 MAZP56270 477 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CLDN15P56746 228 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 RPS24P62847 133 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 PITX1P78337 314 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CSNK1G2P78368 415 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 MYBPC1Q00872 1141 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 LRRC74AQ0VAA2 488 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 STX1AQ16623 288 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 KYAT1Q16773 422 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ACCSLQ4AC99 568 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 SIRPB2Q5JXA9 342 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 IL23RQ5VWK5 629 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CES4AQ5XG92 561 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 KLHL10Q6JEL2 608 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 GFRALQ6UXV0 394 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 TMEM26Q6ZUK4 368 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 KCTD8Q6ZWB6 473 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 TECPR1Q7Z6L1 1165 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ZER1Q7Z7L7 766 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ACOT1Q86TX2 421 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 BIVMQ86UB2 503 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CUZD1Q86UP6 607 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 IQCKQ8N0W5 287 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 FBXL14Q8N1E6 418 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CIARTQ8N365 385 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 LRRC52Q8N7C0 313 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 GBP7Q8N8V2 638 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 SIDT2Q8NBJ9 832 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ST6GALNAC3Q8NDV1 305 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CCL4L1Q8NHW4 92 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ZNF473Q8WTR7 871 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 SHC3Q92529 594 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 RPL36ALQ969Q0 106 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ZNF274Q96GC6 653 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ELMO2Q96JJ3 720 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ZNF583Q96ND8 569 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 COQ7Q99807 217 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 PRMT1Q99873 361 aaKnown RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 FOXC2Q99958 501 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 DDA1Q9BW61 102 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ACPTQ9BZG2 426 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ROPN1Q9HAT0 212 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ACOXLQ9NUZ1 547 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 ERVK-18Q9QC07 812 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 IL36AQ9UHA7 158 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 HPCAL4Q9UM19 191 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 FAF1Q9UNN5 650 aaPredicted RBP3.36□□□□□ -1.87
LIMA1-208ENST00000551691 SCML2Q9UQR0 700 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 CSAG2Q9Y5P2 127 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 TRPM6Q9BX84 2022 aa3.36□□□□□ -1.87
LIMA1-208ENST00000551691 FAM230AA0A1W2PPH8 454 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 F8WDY8 70 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 H3BMM5 538 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 LGALS8O00214 317 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 KPNA3O00505 521 aaPredicted RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CCL21O00585 134 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CHEK1O14757 476 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 ANGPT2O15123 496 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 MAPK13O15264 365 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 INPP4BO15327 924 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 SYNGR3O43761 229 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 DPM1O60762 260 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 TSC22D2O75157 780 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 LRCH4O75427 683 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 DEXIO95424 95 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 SYNGR4O95473 234 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CPNE6O95741 557 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 BMP15O95972 392 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 PIGRP01833 764 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CRYABP02511 175 aaKnown RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 KRT6BP04259 564 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 STSP08842 583 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 RRASP10301 218 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 THRBP10828 461 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 F3P13726 295 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CTSEP14091 401 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 ANPEPP15144 967 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 CTNNA2P26232 953 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 ADORA2BP29275 332 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 PRDX6P30041 224 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 SOX6P35712 828 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 RBMXP38159 391 aaKnown RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 NKX2-1P43699 371 aaPredicted RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 KRT6CP48668 564 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 HOXA1P49639 335 aaPredicted RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 TNFSF10P50591 281 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 DNA2P51530 1060 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 LIMK2P53671 638 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 PFN3P60673 137 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 TRA2BP62995 288 aaKnown RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 NUCB2P80303 420 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 HSF2Q03933 536 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 GABPB1Q06547 395 aaPredicted RBP3.35□□□□□ -1.87
LIMA1-208ENST00000551691 DLG1Q12959 904 aa3.35□□□□□ -1.87
LIMA1-208ENST00000551691 PDZK1IP1Q13113 114 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms