RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 AP1M2Q9Y6Q5 423 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TGP01266 2768 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IGLV5-37A0A075B6J1 123 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 KCNE1BA0A087WTH5 132 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 A0A096LNT2 108 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TRAV17A0A0B4J275 112 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0B4J293 547 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0G2JPF8 293 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 A0A0J9YY10 115 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GLYATL1P3A0A0U1RQE8 302 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1B0GX78 115 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR2M5A3KFT3 312 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PINLYPA6NC86 204 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FAM90A10PA6NDY2 464 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IQCF5A8MTL0 148 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PDZK1P1A8MUH7 402 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ARHGEF33A8MVX0 844 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TMCO5BA8MYB1 307 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 C2orf74A8MZ97 194 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HNRNPCL3B7ZW38 293 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GFYI3L273 518 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PRKNO60260 465 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR2B3O76000 313 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 KDM4BO94953 1096 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 C1orf105O95561 183 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TSPAN12O95859 305 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TOMM40O96008 361 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IGHG3P01860 377 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 KLK3P07288 261 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HNRNPCL4P0DMR1 293 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HLA-DPA1P20036 260 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 S1PR1P21453 382 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CD9P21926 228 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ACHEP22303 614 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TCEA1P23193 301 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 EEF1B2P24534 225 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PSMB5P28074 263 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ARRB2P32121 409 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OTX2P32243 289 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SERPINB6P35237 376 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SLC9A3P48764 834 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 NR2C2P49116 596 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 EEF1A1P68104 462 aaKnown RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PMP22Q01453 160 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 MYL5Q02045 173 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 RBPJQ06330 500 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TRAF3Q13114 568 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 MYBPHQ13203 477 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 XRCC4Q13426 336 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SCARB2Q14108 478 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SIX1Q15475 284 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 HYAL4Q2M3T9 481 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF260Q3ZCT1 412 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FBXL19-AS1Q494R0 122 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GPR33Q49SQ1 333 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 GCNT6Q5T4J0 391 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 EEF1A1P5Q5VTE0 462 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 C1orf189Q5VU69 101 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 AGAP7PQ5VUJ5 663 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IRAK1BP1Q5VVH5 260 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SPINK14Q6IE38 97 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TEX38Q6PEX7 206 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FIGLAQ6QHK4 219 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF704Q6ZNC4 412 aaPredicted RBP2.13□□□□□ -2.07
CPSF6-207ENST00000551516 DNM1P46Q6ZS02 220 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ZBTB49Q6ZSB9 765 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SHISA6Q6ZSJ9 500 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 FAM47EQ6ZV65 393 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SNX20Q7Z614 316 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SERPINA9Q86WD7 417 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OOSP2Q86WS3 158 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TRAPPC5Q8IUR0 188 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CFAP206Q8IYR0 622 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR8H3Q8N146 312 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 IQCF1Q8N6M8 205 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 BCORP1Q8N888 145 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 NEXN-AS1Q8NBZ9 246 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CAMKVQ8NCB2 501 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 APCDD1LQ8NCL9 501 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 MSANTD4Q8NCY6 345 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PPFIBP2Q8ND30 876 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PLPP5Q8NEB5 264 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 WFDC11Q8NEX6 87 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 Q8NFD4 153 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR2L3Q8NG85 312 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR4K1Q8NGD4 311 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR8K1Q8NGG5 319 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR52K1Q8NGK4 314 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 OR2L8Q8NGY9 312 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SPATA3Q8NHX4 192 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TMED6Q8WW62 240 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 SLC44A1Q8WWI5 657 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 LCN9Q8WX39 176 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 ATL1Q8WXF7 558 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 PHF21AQ96BD5 680 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 CXorf40BQ96DE9 158 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 VMP1Q96GC9 406 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM19Q96HH6 336 aa2.13□□□□□ -2.07
CPSF6-207ENST00000551516 THOC3Q96J01 351 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms