RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	CCL11	P51671	97 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF136	P52737	540 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	GAS1	P54826	345 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	UCN	P55089	124 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	SKP2	Q13309	424 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	MFAP5	Q13361	173 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	SNTA1	Q13424	505 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	TUBA3C	Q13748	450 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	NPTX1	Q15818	432 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ATP6AP1	Q15904	470 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	NDUFAF6	Q330K2	333 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	SLC22A10	Q63ZE4	541 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	BICRAL	Q6AI39	1079 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	TUBA3E	Q6PEY2	450 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	UNQ6494/PRO21346	Q6UXR6	183 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	LRRC69	Q6ZNQ3	347 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	LINC00696	Q6ZRV3	163 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ERMP1	Q7Z2K6	904 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	MISP	Q8IVT2	679 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF440	Q8IYI8	595 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	LILRA2	Q8N149	483 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	PQLC1	Q8N2U9	271 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	PHOSPHO1	Q8TCT1	267 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	PAQR8	Q8TEZ7	354 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	LRTOMT	Q8WZ04	291 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF300	Q96RE9	604 aa	Predicted RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF347	Q96SE7	839 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	UTP23	Q9BRU9	249 aa	Known RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF552	Q9H707	407 aa	Predicted RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	KLRF1	Q9NZS2	232 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	CNIH4	Q9P003	139 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	DNAJB9	Q9UBS3	223 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	CNOT11	Q9UKZ1	510 aa	Known RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ANKRD33B	A6NCL7	494 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205		K7ENP7	123 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CLOCK	O15516	846 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF264	O43296	627 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	FMO6P	O60774	539 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	DEAF1	O75398	565 aa	Predicted RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	BAG2	O95816	211 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	WDPCP	O95876	746 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CST1	P01037	141 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	LDLR	P01130	860 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	GKN3P	P0CG01	181 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CCL3	P10147	92 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRG2	P13727	222 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	RHCE	P18577	417 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CD96	P40200	585 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	PTGDS	P41222	190 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CASP3	P42574	277 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	TMPRSS3	P57727	454 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	OC90	Q02509	493 aa	Predicted RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF117	Q03924	483 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	C17orf67	Q0P5P2	114 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	FBXW10	Q5XX13	1052 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	SLC30A6	Q6NXT4	461 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	INO80C	Q6PI98	192 aa	Predicted RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	DEF8	Q6ZN54	512 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF550	Q7Z398	422 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	MDGA2	Q7Z553	956 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CYP4Z1	Q86W10	505 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	PHF10	Q8WUB8	498 aa	Known RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	NTNG2	Q96CW9	530 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	FRMD6	Q96NE9	622 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	PKP2	Q99959	881 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	OSBPL11	Q9BXB4	747 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	LAT2	Q9GZY6	243 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	RNF32	Q9H0A6	362 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CPNE5	Q9HCH3	593 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	HHATL	Q9HCP6	504 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	GALNT9	Q9HCQ5	603 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	ANKRD10	Q9NXR5	420 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	TES	Q9UGI8	421 aa	Known RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	RIMS3	Q9UJD0	308 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	CARD8	Q9Y2G2	431 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	FAM32A	Q9Y421	112 aa	Known RBP	11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205	WIF1	Q9Y5W5	379 aa		11.18	□□□□□ -0.62
ERBB3-208	ENST00000549205		A0A087WV48	116 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	AP3D1	O14617	1153 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	FFAR1	O14842	300 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	HCRTR2	O43614	444 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	TPST2	O60704	377 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	DPM1	O60762	260 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ADAM11	O75078	769 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	SEMA7A	O75326	666 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	CYP7B1	O75881	506 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	DIRAS1	O95057	198 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRSS23	O95084	383 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ITPKB	P27987	946 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ACAA2	P42765	397 aa	Known RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	YAP1	P46937	504 aa	Known RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	HOXC5	Q00444	222 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	EPS8	Q12929	822 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRAMEF20	Q5VT98	475 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR2T5	Q6IEZ7	315 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	HMBOX1	Q6NT76	420 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	CBLN3	Q6UW01	205 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms