RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TNFAIP8L2Q6P589 184 aaPredicted RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 ZNF621Q6ZSS3 439 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 C16orf62Q7Z3J2 963 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 RNF130Q86XS8 419 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 TOR1AIP2Q8NFQ8 470 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 B4GALNT2Q8NHY0 566 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 PHOSPHO1Q8TCT1 267 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 XAGE5Q8WWM1 108 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 RAB8BQ92930 207 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ROPN1LQ96C74 230 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ITCHQ96J02 903 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ZFP3Q96NJ6 502 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 TM9SF2Q99805 663 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 SIKE1Q9BRV8 207 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 UCK2Q9BZX2 261 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 NPDC1Q9NQX5 325 aaPredicted RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 MED17Q9NVC6 651 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 KCNE5Q9UJ90 142 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ICAM5Q9UMF0 924 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 LIPT1Q9Y234 373 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 ZNF337Q9Y3M9 751 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 AP4B1Q9Y6B7 739 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 LRBAP50851 2863 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 FBN2P35556 2912 aa10.72□□□□□ -0.69
YBX3-217ENST00000546164 INTS1Q8N201 2190 aaKnown RBP10.72□□□□□ -0.69
YBX3-217ENST00000546164 PRAMEF27A3QJZ7 478 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 NKX2-6A6NCS4 301 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ETV2O00321 342 aaPredicted RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 DVL2O14641 736 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 OIP5O43482 229 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 EIF4E2O60573 245 aaKnown RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 DNAJA2O60884 412 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 UGT2B17O75795 530 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 KRT75O95678 551 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 C1QCP02747 245 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 GSNP06396 782 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 LINGO3P0C6S8 592 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 COX6B1P14854 86 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ADH6P28332 368 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 EIF1P41567 113 aaKnown RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 P2RX1P51575 399 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ZNF41P51814 821 aaPredicted RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 ZNF136P52737 540 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 MVDP53602 400 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 CASP9P55211 416 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 SRYQ05066 204 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 FBXL19-AS1Q494R0 122 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 TIGD2Q4W5G0 525 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 PDZK1Q5T2W1 519 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ARHGAP21Q5T5U3 1957 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 TYW3Q6IPR3 259 aaKnown RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 CBLN3Q6UW01 205 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 FUNDC1Q8IVP5 155 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 METTL25Q8N6Q8 603 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 C9orf106Q8NAJ2 232 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 OR5M1Q8NGP8 315 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ZFP90Q8TF47 636 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 GTF2H4Q92759 462 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 ARSGQ96EG1 525 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 SH3YL1Q96HL8 342 aaPredicted RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 TRNT1Q96Q11 434 aaKnown RBP10.71□□□□□ -0.69
YBX3-217ENST00000546164 SLC6A13Q9NSD5 602 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 STOML1Q9UBI4 398 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 VDAC3Q9Y277 283 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 WDR45Q9Y484 360 aa10.71□□□□□ -0.69
YBX3-217ENST00000546164 TACC2O95359 2948 aa10.71□□□□□ -0.7
YBX3-217ENST00000546164 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 PCNX3Q9H6A9 2034 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 CENPVL1A0A0U1RR11 272 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 GTPBP1O00178 669 aaKnown RBP10.7□□□□□ -0.7
YBX3-217ENST00000546164 ZNF264O43296 627 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 GMFGO60234 142 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 RCBTB2O95199 551 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 UBL4AP11441 157 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 HOXB9P17482 250 aaPredicted RBP10.7□□□□□ -0.7
YBX3-217ENST00000546164 CTSSP25774 331 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 ELK4P28324 431 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 OPRM1P35372 400 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 SUCLG1P53597 346 aaKnown RBP10.7□□□□□ -0.7
YBX3-217ENST00000546164 CLDN20P56880 219 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 RAC1P63000 192 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 FGFBP1Q14512 234 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 GPR68Q15743 365 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 SLC25A53Q5H9E4 307 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 DNAJC14Q6Y2X3 702 aaPredicted RBP10.7□□□□□ -0.7
YBX3-217ENST00000546164 FRRS1Q6ZNA5 592 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 LRRC74BQ6ZQY2 392 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 GGNQ86UU5 652 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 ZNF619Q8N2I2 560 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 ARFGAP2Q8N6H7 521 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 RELL2Q8NC24 303 aaPredicted RBP10.7□□□□□ -0.7
YBX3-217ENST00000546164 FAM71CQ8NEG0 241 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 OR5W2Q8NH69 310 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 POC1BQ8TC44 478 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 PMM1Q92871 262 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 VPS33AQ96AX1 596 aa10.7□□□□□ -0.7
YBX3-217ENST00000546164 KLHDC3Q9BQ90 382 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms