RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 FAM83EQ2M2I3 478 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 MST1LQ2TV78 715 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 IQCCQ4KMZ1 466 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 TECRLQ5HYJ1 363 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 METTL2BQ6P1Q9 378 aaKnown RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 C3orf62Q6ZUJ4 267 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 CYS1Q717R9 158 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 ZAR1Q86SH2 424 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 GAS2L3Q86XJ1 694 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 SAMD14Q8IZD0 417 aaPredicted RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 OR2L13Q8N349 312 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 SLC35F6Q8N357 371 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 CDYL2Q8N8U2 506 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 FAM110BQ8TC76 370 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 ACTRT2Q8TDY3 377 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 C16orf78Q8WTQ4 265 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 ZNF300Q96RE9 604 aaPredicted RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 BBS4Q96RK4 519 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 INPP5KQ9BT40 448 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 C1QTNF6Q9BXI9 259 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 BHLHE41Q9C0J9 482 aaPredicted RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 BPESC1Q9GZL8 116 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 BRF2Q9HAW0 419 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 GIMAP4Q9NUV9 329 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 TMEFF2Q9UIK5 374 aaPredicted RBP8.25□□□□□ -1.09
CHD4-212ENST00000545083 ZNF225Q9UK10 706 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 PPP2R2CQ9Y2T4 447 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 SNX24Q9Y343 169 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 SLC25A15Q9Y619 301 aa8.25□□□□□ -1.09
CHD4-212ENST00000545083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD4-212ENST00000545083 M0R1B8 84 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 OIP5O43482 229 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 RGS14O43566 566 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 PCDH7O60245 1069 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 RAD51DO75771 328 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 KLHL2O95198 593 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 IGHV3-9P01782 118 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 NCBP2P52298 156 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD4-212ENST00000545083 PSMD4P55036 377 aaKnown RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 ACTG1P63261 375 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 MRPS25P82663 173 aaKnown RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 SLC29A2Q14542 456 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 TRADDQ15628 312 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 TMEM176BQ3YBM2 270 aaPredicted RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 P2RY8Q86VZ1 359 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 PLD6Q8N2A8 252 aaKnown RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 ANKS4BQ8N8V4 417 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 GLIPR2Q9H4G4 154 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 OCEL1Q9H607 264 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 ANKZF1Q9H8Y5 726 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 DDX18Q9NVP1 670 aaKnown RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 VPS29Q9UBQ0 182 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 MRTO4Q9UKD2 239 aaKnown RBP8.24□□□□□ -1.09
CHD4-212ENST00000545083 SNX12Q9UMY4 172 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 ATP23Q9Y6H3 246 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 PMF1-BGLAPU3KQ54 211 aa8.24□□□□□ -1.09
CHD4-212ENST00000545083 A0A096LPK6 155 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 A0A1W2PNR3 127 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 GNG14A0A1W2PPG7 69 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 LOC390937A0A1W2PQ73 354 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 TMEM89A2RUT3 159 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 MANBAO00462 879 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ZNF195O14628 629 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 RGS9O75916 674 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 OR4F21O95013 312 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 KCNH1O95259 989 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 NGFRP08138 427 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 RPS17P08708 135 aaKnown RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 ELK4P28324 431 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 APOBEC3AP31941 199 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 MAP3K8P41279 467 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 HTR6P50406 440 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 RNF144AP50876 292 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 CDH13P55290 713 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 FOXG1P55316 489 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 DEFA6Q01524 100 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 CHRNB3Q05901 458 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ZNHIT3Q15649 155 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 TOMM34Q15785 309 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 ZSWIM7Q19AV6 140 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 GLE1Q53GS7 698 aaKnown RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 ARL13AQ5H913 290 aaPredicted RBP8.23□□□□□ -1.09
CHD4-212ENST00000545083 MROH9Q5TGP6 573 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 SSX8Q7RTT4 187 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 SLC43A2Q8N370 569 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ATP6V1C2Q8NEY4 427 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 FBXO27Q8NI29 283 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ZFP90Q8TF47 636 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 ELP4Q96EB1 424 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 FBXO17Q96EF6 278 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 APIPQ96GX9 242 aa8.23□□□□□ -1.09
CHD4-212ENST00000545083 TRMOQ9BU70 441 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms