RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF597Q96LX8 424 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 TTC25Q96NG3 672 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 RPP25Q9BUL9 199 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 API5Q9BZZ5 524 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 TSPY26PQ9H489 355 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ZDHHC18Q9NUE0 388 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 RBM28Q9NW13 759 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 UTP6Q9NYH9 597 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 MUTYHQ9UIF7 546 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 RARRES3Q9UL19 164 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 GON4LQ3T8J9 2241 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 DNAH12Q6ZR08 3092 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 EYSQ5T1H1 3165 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 H0YCG3 227 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 CASKO14936 926 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ARHGEF9O43307 516 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 TM7SF2O76062 418 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 HCKP08631 526 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 PRG2P13727 222 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ATP6V1C1P21283 382 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 PSMA5P28066 241 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ADSSP30520 456 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 BRCC3P46736 316 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 GSK3BP49841 420 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 HNMTP50135 292 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 SLC7A2P52569 658 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 NAPAP54920 295 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 DYNLL1P63167 89 aaKnown RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF85Q03923 595 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 BNIP1Q12981 228 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 TMEM52BQ4KMG9 183 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 C2CD6Q53TS8 623 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ACER2Q5QJU3 275 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 FAM219BQ5XKK7 198 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 CASC1Q6TDU7 716 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 HACD2Q6Y1H2 254 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 OR4Q3Q8NH05 313 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 NTNG2Q96CW9 530 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 GSDMCQ9BYG8 508 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 OCR1Q9BZK8 76 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 RMND5AQ9H871 391 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 ELL3Q9HB65 397 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 DCAF13Q9NV06 445 aaKnown RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 XPO7Q9UIA9 1087 aaKnown RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 SNX6Q9UNH7 406 aa3.01□□□□□ -1.93
SCFD1-207ENST00000544052 RRP15Q9Y3B9 282 aaKnown RBP3.01□□□□□ -1.93
SCFD1-207ENST00000544052 FBLL1A6NHQ2 334 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 LRRC30A6NM36 301 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 PDLIM1O00151 329 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 E2F3O00716 465 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CXCL11O14625 94 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 XPO1O14980 1071 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 CHRNA1P02708 482 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CCL5P13501 91 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 SPRP35270 261 aaPredicted RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 CAPGP40121 348 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 ETV5P41161 510 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CSRP3P50461 194 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 RIDAP52758 137 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 GSTO1P78417 241 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CAMK4Q16566 473 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 SLC36A3Q495N2 470 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 LINC01620Q4KN68 170 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 C14orf177Q52M58 125 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 TAF3Q5VWG9 929 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 LRRC8BQ6P9F7 803 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF613Q6PF04 617 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 APOOLQ6UXV4 268 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 TSEN54Q7Z6J9 526 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 RNF130Q86XS8 419 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 TAF15Q92804 592 aaKnown RBP eCLIP3□□□□□ -1.936e-10■■■□□ 17.7
SCFD1-207ENST00000544052 OSTF1Q92882 214 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 ART4Q93070 314 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 DNAJA3Q96EY1 480 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 DHTKD1Q96HY7 919 aaPredicted RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 GPA33Q99795 319 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CRACR2AQ9BSW2 395 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 MCRIP2Q9BUT9 160 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 TBC1D10AQ9BXI6 508 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 RHOJQ9H4E5 214 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 SP140LQ9H930 580 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 GPN2Q9H9Y4 310 aaPredicted RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 FARSBQ9NSD9 589 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 DUS2Q9NX74 493 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 KLRF1Q9NZS2 232 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 MDFICQ9P1T7 246 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CPQQ9Y646 472 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 SF3B1O75533 1304 aaKnown RBP eCLIP3□□□□□ -1.933e-6■■■■■ 57.3
SCFD1-207ENST00000544052 LAMA2P24043 3122 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 TDRD15B5MCY1 1934 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 MPHOSPH10O00566 681 aaKnown RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 CNMDO75829 334 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 WNT2P09544 360 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 HSD17B1P14061 328 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CA8P35219 290 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 PRPHP41219 470 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 HMGCS2P54868 508 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms