RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TSPAN7P41732 249 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 NR0B1P51843 470 aaKnown RBP18.25■□□□□ 0.51
COPS7A-218ENST00000543939 PIGFQ07326 219 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 SLCO6A1Q86UG4 719 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 KIF18BQ86Y91 864 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 LSMEM1Q8N8F7 131 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 C17orf47Q8NEP4 570 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 B3GNT7Q8NFL0 401 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 PMEPA1Q969W9 287 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 ARSGQ96EG1 525 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 TRIM2Q9C040 744 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 POLR1BQ9H9Y6 1135 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 PLCXD1Q9NUJ7 323 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 CNIH4Q9P003 139 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 SLC35A3Q9Y2D2 325 aa18.25■□□□□ 0.51
COPS7A-218ENST00000543939 M0R129 80 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 MPZL2O60487 215 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 FAM20BO75063 409 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 JUNBP17275 347 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-218ENST00000543939 FPR3P25089 353 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 TMEM205Q6UW68 189 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 RASSF6Q6ZTQ3 369 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 P3H2Q8IVL5 708 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 PRR22Q8IZ63 422 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 RNF113BQ8IZP6 322 aaKnown RBP18.24■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF527Q8NB42 609 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 POGLUT1Q8NBL1 392 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 FAM71CQ8NEG0 241 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 HSPBAP1Q96EW2 488 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 NODALQ96S42 347 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 WDR77Q9BQA1 342 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-218ENST00000543939 WDR54Q9H977 334 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 SLC39A1Q9NY26 324 aa18.24■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF223Q9UK11 482 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-218ENST00000543939 A0A1B0GWA3 101 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CDC14CA4D256 554 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 TSPAN2O60636 221 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 TBXA2RP21731 343 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 NDUFAF6Q330K2 333 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 SLC34A3Q8N130 599 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 AMER2Q8N7J2 671 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 SUMF1Q8NBK3 374 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 APCDD1LQ8NCL9 501 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 TMEM239Q8WW34 195 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 DGCR14Q96DF8 476 aaKnown RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 ADOQ96SZ5 270 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CMKLR1Q99788 373 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CRB3Q9BUF7 120 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 ERVK-18Q9QC07 812 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 A0A0C4DFX4 3053 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CHP2O43745 196 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 REM1O75628 298 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 KLK3P07288 261 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 STAT5AP42229 794 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 GIPRP48546 466 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 RNF4P78317 190 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CDK5Q00535 292 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 PMS2P3Q13401 168 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 XAF1Q6GPH4 301 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 PAPD4Q6PIY7 484 aaKnown RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 PTCHD4Q6ZW05 846 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CPEB2Q7Z5Q1 589 aaKnown RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF440Q8IYI8 595 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF540Q8NDQ6 660 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 IPCEF1Q8WWN9 437 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 RHNO1Q9BSD3 238 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 EDEM2Q9BV94 578 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 DSN1Q9H410 356 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 SLC25A19Q9HC21 320 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 KRCC1Q9NPI7 259 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 AKAP7Q9P0M2 348 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 NXT1Q9UKK6 140 aaKnown RBP18.23■□□□□ 0.51
COPS7A-218ENST00000543939 CEPT1Q9Y6K0 416 aa18.23■□□□□ 0.51
COPS7A-218ENST00000543939 SCDO00767 359 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 GPR4P46093 362 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 SNRPGP62308 76 aaKnown RBP18.22■□□□□ 0.51
COPS7A-218ENST00000543939 GINS1Q14691 196 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 CD226Q15762 336 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 NEDD8Q15843 81 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 ZBED5Q49AG3 693 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 FAM198BQ6UWH4 519 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 APOOLQ6UXV4 268 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 GRHL3Q8TE85 626 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 TP53INP1Q96A56 240 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 OMA1Q96E52 524 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 PLA2G12AQ9BZM1 189 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 ULBP3Q9BZM4 244 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 EGLN3Q9H6Z9 239 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 CCNB1IP1Q9NPC3 277 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 SNX5Q9Y5X3 404 aa18.22■□□□□ 0.51
COPS7A-218ENST00000543939 H3BSA7 217 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 MRPS14O60783 128 aaKnown RBP18.21■□□□□ 0.51
COPS7A-218ENST00000543939 ICOSLGO75144 302 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 HPGDP15428 266 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 IL12BP29460 328 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 PSPHP78330 225 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 PRKCDQ05655 676 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 PLCXD2Q0VAA5 305 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 DESI1Q6ICB0 168 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 FAM199XQ6PEV8 388 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms