RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 H0YC42 278 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CLIC1O00299 241 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF264O43296 627 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 SEC14L5O43304 696 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 KIAA0513O60268 411 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TOXO94900 526 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CSTAP01040 98 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CHRM4P08173 479 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF708P17019 499 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 P2RX1P51575 399 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CCR4P51679 360 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 MVDP53602 400 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CLDN18P56856 261 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TXNL4AP83876 142 aaKnown RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CHRNEQ04844 493 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 MAPK14Q16539 360 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 BCL2A1Q16548 175 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TMEM44Q2T9K0 475 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 PLPPR5Q32ZL2 321 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 GLYR1Q49A26 553 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 PAGE3Q5JUK9 113 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 RIPPLY2Q5TAB7 128 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 METTL21CQ5VZV1 264 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TYW3Q6IPR3 259 aaKnown RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CGB2Q6NT52 195 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 PLXDC2Q6UX71 529 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 FRRS1Q6ZNA5 592 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 LACC1Q8IV20 430 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF619Q8N2I2 560 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ANKFN1Q8N957 763 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TNIP2Q8NFZ5 429 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZPLD1Q8TCW7 415 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZG16BQ96DA0 208 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 RNF145Q96MT1 663 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TRNT1Q96Q11 434 aaKnown RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 NPAS1Q99742 590 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 UCK2Q9BZX2 261 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 QRSL1Q9H0R6 528 aaKnown RBP8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ZNF385DQ9H6B1 395 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 SLC52A3Q9NQ40 469 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 TMEM45AQ9NWC5 275 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 SLAMF8Q9P0V8 285 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 P2RX2Q9UBL9 471 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 Q9UFV3 132 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 ICAM5Q9UMF0 924 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 LIPT1Q9Y234 373 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 L3MBTL1Q9Y468 752 aa8.34□□□□□ -1.07
SNHG1-215ENST00000540904 DNAJC13O75165 2243 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 DIDO1Q9BTC0 2240 aaKnown RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 A0A1W2PP18 115 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 NKX2-6A6NCS4 301 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CLDN24A6NM45 220 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CLCA1A8K7I4 914 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 HSPB2A8KAH6 182 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 LINC01387J3KSC0 135 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 EIF4E2O60573 245 aaKnown RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 IL2RAP01589 272 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 OPN1LWP04000 364 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 BCHEP06276 602 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 GUSBP08236 651 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 LINGO3P0C6S8 592 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 PEPDP12955 493 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF17P17021 662 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 TIMP3P35625 211 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 MAGEA8P43361 318 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ARFIP2P53365 341 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 SUMO3P55854 103 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CLDN20P56880 219 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 DSTNP60981 165 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 FOXF1Q12946 379 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 TOMM34Q15785 309 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 HSPB2Q16082 182 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 LRIF1Q5T3J3 769 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ZNF787Q6DD87 383 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 LRRC74BQ6ZQY2 392 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 EIF3MQ7L2H7 374 aaKnown RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 GRAMD2AQ8IUY3 354 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 LIX1LQ8IVB5 337 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 GTPBP8Q8N3Z3 284 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-215ENST00000540904 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 TOR1AIP2Q8NFQ8 470 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 OR5W2Q8NH69 310 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ZBTB8AQ96BR9 441 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 ARSGQ96EG1 525 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 SLC38A1Q9H2H9 487 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 RUBCNLQ9H714 662 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 TMEM185BQ9H7F4 350 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CALHM2Q9HA72 323 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
SNHG1-215ENST00000540904 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms