RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 RPL3P39023 403 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 PTGDSP41222 190 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 DNASE1L1P49184 302 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 AGFG1P52594 562 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 PRKAG1P54619 331 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NME5P56597 212 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 HBA1P69905 142 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 PGS1Q32NB8 556 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 EXOSC6Q5RKV6 272 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 PRAMEF20Q5VT98 475 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 BICRALQ6AI39 1079 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NXNQ6DKJ4 435 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 C1orf229Q6ZS94 237 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NUP54Q7Z3B4 507 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 SLC44A2Q8IWA5 706 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 CLECL1Q8IZS7 167 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NATD1Q8N6N6 113 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NUP43Q8NFH3 380 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 OR8J2Q8NGG1 315 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 CEP70Q8NHQ1 597 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 MBD3L2Q8NHZ7 208 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 SPPL2AQ8TCT8 520 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 OR5P2Q8WZ92 322 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 TMBIM1Q969X1 311 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 TESCQ96BS2 214 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 OMA1Q96E52 524 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 FAM120BQ96EK7 910 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 BTBD9Q96Q07 612 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 NODALQ96S42 347 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 PRPF18Q99633 342 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 LMF2Q9BU23 707 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 DPY30Q9C005 99 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 BHLHE41Q9C0J9 482 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 CXorf36Q9H7Y0 433 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 CALHM2Q9HA72 323 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 SACM1LQ9NTJ5 587 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 QPCTLQ9NXS2 382 aa7.99□□□□□ -1.13
TRAPPC1-202ENST00000540486 GXYLT2A0PJZ3 443 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 KDM4EB2RXH2 506 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 RNASET2O00584 256 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ACOX3O15254 700 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 EMC8O43402 210 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 EDF1O60869 148 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 COQ9O75208 318 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 REM1O75628 298 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 PPM1BO75688 479 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 TGDSO95455 350 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 C1QCP02747 245 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 P04436 131 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 GABRA3P34903 492 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 CASP3P42574 277 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 CCT3P49368 545 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 AQP5P55064 265 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 NRG3P56975 720 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 EEF1A1P68104 462 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 EEF1A1P5Q5VTE0 462 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 LUZP2Q86TE4 346 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 DND1Q8IYX4 353 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 CLEC4FQ8N1N0 589 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 SLC16A11Q8NCK7 471 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 FAM13CQ8NE31 585 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ZFP28Q8NHY6 868 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 THOC1Q96FV9 657 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 SLC35A4Q96G79 324 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 MARK4Q96L34 752 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ZFP3Q96NJ6 502 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 WFIKKN1Q96NZ8 548 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 TIMP4Q99727 224 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 SFXN3Q9BWM7 321 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ANGPTL4Q9BY76 406 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 PIGMQ9H3S5 423 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ESRP2Q9H6T0 727 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 SDR39U1Q9NRG7 319 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ATAD3AQ9NVI7 634 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 TUBA8Q9NY65 449 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 CNIH4Q9P003 139 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 MAPRE3Q9UPY8 281 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 ROS1P08922 2347 aa7.98□□□□□ -1.13
TRAPPC1-202ENST00000540486 PRSS51A0A1B0GVH4 220 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 OR6C70A6NIJ9 312 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 LRRC3CA6NJW4 275 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 CAPN14A8MX76 684 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 A8MXE2 369 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 TP53I11O14683 189 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 UBDO15205 165 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 TRIM3O75382 744 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 NKX2-2O95096 273 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 IGKV1D-16P01601 117 aa7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 HMGN2P05204 90 aaKnown RBP7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 TMIGD3P0DMS9 266 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC1-202ENST00000540486 ACP2P11117 423 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms