RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ACTL6AO96019 429 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 KRT16P08779 473 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 LOXP28300 417 aaPredicted RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 S100A3P33764 101 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 SOAT1P35610 550 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 PRKAG1P54619 331 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 PSMD4P55036 377 aaKnown RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 NME5P56597 212 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 UFM1P61960 85 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 IRX1P78414 480 aaPredicted RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 LRRC74AQ0VAA2 488 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 MFSD12Q6NUT3 480 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 CNEP1R1Q8N9A8 125 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 SMPDL3BQ92485 455 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 HOXB13Q92826 284 aaPredicted RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 CXorf36Q9H7Y0 433 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
USB1-203ENST00000539737 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 PRSS51A0A1B0GVH4 220 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 SLC22A3O75751 556 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 KCNH1O95259 989 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 PLAUP00749 431 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
USB1-203ENST00000539737 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
USB1-203ENST00000539737 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.25
USB1-203ENST00000539737 IDH3AP50213 366 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 LHX2P50458 406 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 HBA1P69905 142 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 TP53BP2Q13625 1128 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 ACKR1Q16570 336 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 DECR1Q16698 335 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 AAGABQ6PD74 315 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 ADGRE4PQ86SQ3 457 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 UBQLNLQ8IYU4 475 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 MIER2Q8N344 545 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 OR4A15Q8NGL6 344 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 JADE3Q92613 823 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 GIMAP5Q96F15 307 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 MARK4Q96L34 752 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 ADOQ96SZ5 270 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 BTNL2Q9UIR0 455 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 DKKL1Q9UK85 242 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.25
USB1-203ENST00000539737 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.26
USB1-203ENST00000539737 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 DYNC1I1O14576 645 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 TSPAN2O60636 221 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 SOX30O94993 753 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 NKX2-2O95096 273 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 CNOT4O95628 575 aaKnown RBP13.45□□□□□ -0.26
USB1-203ENST00000539737 HMGN2P05204 90 aaKnown RBP13.45□□□□□ -0.26
USB1-203ENST00000539737 IL6P05231 212 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 PGRP06401 933 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 ALOX5P09917 674 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
USB1-203ENST00000539737 MAP3K8P41279 467 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 PNLIPRP2P54317 469 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 CLDN18P56856 261 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 LASP1Q14847 261 aaKnown RBP13.45□□□□□ -0.26
USB1-203ENST00000539737 CHMP1BQ7LBR1 199 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 IFNEQ86WN2 208 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 CLECL1Q8IZS7 167 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 OR4K17Q8NGC6 315 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 GPR151Q8TDV0 419 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 FIG4Q92562 907 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 SLC9A6Q92581 669 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 TEX37Q96LM6 180 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 CCDC115Q96NT0 180 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 STACQ99469 402 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 OR2B2Q9GZK3 357 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 CCDC134Q9H6E4 229 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 NPHS2Q9NP85 383 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 SDHAF3Q9NRP4 125 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 DUSP22Q9NRW4 184 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 GIN1Q9NXP7 522 aa13.45□□□□□ -0.26
USB1-203ENST00000539737 FAF1Q9UNN5 650 aaPredicted RBP13.45□□□□□ -0.26
USB1-203ENST00000539737 CHD3Q12873 2000 aaKnown RBP13.45□□□□□ -0.26
USB1-203ENST00000539737 SCN2BO60939 215 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 ACP2P11117 423 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 CPN1P15169 458 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 IL12AP29459 219 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 GABRA3P34903 492 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 PTH2RP49190 550 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 ATP4BP51164 291 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 GFRA1P56159 465 aa13.44□□□□□ -0.26
USB1-203ENST00000539737 CLDN15P56746 228 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms