RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 METAP1P53582 386 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SNTA1Q13424 505 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ELAVL3Q14576 367 aaKnown RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 EIPR1Q53HC9 387 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 C9orf64Q5T6V5 341 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 HEPHL1Q6MZM0 1159 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SLC48A1Q6P1K1 146 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 KRT74Q7RTS7 529 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ADGRD2Q7Z7M1 963 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SIX5Q8N196 739 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 LSMEM1Q8N8F7 131 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 OR11H4Q8NGC9 324 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 OR8K5Q8NH50 307 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 HAVCR2Q8TDQ0 301 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 KLK6Q92876 244 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 TIMP4Q99727 224 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ACTRT3Q9BYD9 372 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 POLMQ9NP87 494 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 DEC1Q9P2X7 70 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 CES1P1Q9UKY3 287 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ZNF443Q9Y2A4 671 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 ATG2AQ2TAZ0 1938 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 LRRN3E7EW58 273 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 MEN1O00255 615 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PRKRAO75569 313 aaKnown RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 ITGA10O75578 1167 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 AIFM1O95831 613 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 SAGP10523 405 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 ADRB3P13945 408 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 RAB3BP20337 219 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PRKACBP22694 351 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 DNASE1P24855 282 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 VIPR2P41587 438 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 DUSP2Q05923 314 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PRDX1Q06830 199 aaKnown RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 BAMBIQ13145 260 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 GRK1Q15835 563 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 GSG1Q2KHT4 349 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 SLC22A10Q63ZE4 541 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PLBD1Q6P4A8 553 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 ARL9Q6T311 187 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 CEACAM19Q7Z692 300 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 SPRED2Q7Z698 418 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 COMMD7Q86VX2 200 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 OR56B4Q8NH76 319 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 ABHD4Q8TB40 342 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 FANK1Q8TC84 345 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 TMEM255BQ8WV15 326 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 KISS1RQ969F8 398 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 CACNG6Q9BXT2 260 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 OR52D1Q9H346 318 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 LRRN3Q9H3W5 708 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 PCYT1BQ9Y5K3 369 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-218ENST00000537641 FKBP7Q9Y680 259 aa11.3□□□□□ -0.6
CPSF7-218ENST00000537641 TRAV1-2A0A0B4J238 106 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 A0A1W2PR48 441 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 FAM86C2PA6NEL3 165 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 DUXAA6NLW8 204 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 I3L521 148 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 BHLHE40O14503 412 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 GPR171O14626 319 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 PRAF2O60831 178 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 SNAPC5O75971 98 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 OR7A10O76100 309 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 NTN1O95631 604 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 SERPINA3P01011 423 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 ZGLP1P0C6A0 271 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 SLC35G4P0C7Q5 338 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 UBL4AP11441 157 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 C4BPBP20851 252 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 ATP5A1P25705 553 aaKnown RBP11.29□□□□□ -0.6
CPSF7-218ENST00000537641 MPIP34949 423 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 CLCNKAP51800 687 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 OR10A3P58181 314 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 ACTC1P68032 377 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 ACTA1P68133 377 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 TAGLNQ01995 201 aaKnown RBP11.29□□□□□ -0.6
CPSF7-218ENST00000537641 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 CAMK2DQ13557 499 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 EXOSC2Q13868 293 aaKnown RBP11.29□□□□□ -0.6
CPSF7-218ENST00000537641 MAPK14Q16539 360 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 AANATQ16613 207 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 GAB4Q2WGN9 574 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
CPSF7-218ENST00000537641 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms