RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CHTF18Q8WVB6 975 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 ZNF514Q96K75 400 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 ZFP3Q96NJ6 502 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 FTSJ1Q9UET6 329 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 TAC3Q9UHF0 121 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 ARPC5O15511 151 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 MT-ND4P03905 459 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 APODP05090 189 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 ACP5P13686 325 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 CRATP43155 626 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 GSG1Q2KHT4 349 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 C5orf46Q6UWT4 87 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 COMMD6Q7Z4G1 85 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SLC30A8Q8IWU4 369 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 TOMM5Q8N4H5 51 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 C12orf45Q8N5I9 185 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 RELL2Q8NC24 303 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 OR4C15Q8NGM1 316 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SLC6A18Q96N87 628 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 MED18Q9BUE0 208 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SHISA3A0PJX4 238 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 LRRC72A6NJI9 287 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 SCAMP2O15127 329 aaKnown RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 CASC3O15234 703 aaKnown RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 RASGRP1O95267 797 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 AHCYP23526 432 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 CHI3L1P36222 383 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 TNFRSF17Q02223 184 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 MELKQ14680 651 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 FAM74A1Q5RGS3 127 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 PRAMEF14Q5SWL7 426 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 PRAMEF13Q5VWM6 474 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 MMP21Q8N119 569 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RAD51AP1Q96B01 352 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 ARL6Q9H0F7 186 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 OR52A5Q9H2C5 316 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RPH3AQ9Y2J0 694 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 FEZF1A0PJY2 475 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 G3V3Q6 166 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 VEGFDO43915 354 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RP2O75695 350 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 STATHP02808 62 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 GPX2P18283 190 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIG1-203ENST00000536218 SOX18P35713 384 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SELENOWP63302 87 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 MTAPQ13126 283 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 ZNF385BQ569K4 471 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 ELP2Q6IA86 826 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 KIAA1211LQ6NV74 962 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 NXPE4Q6UWF7 544 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 QSOX2Q6ZRP7 698 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 LRRTM4Q86VH4 590 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SYNPOQ8N3V7 929 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 UXS1Q8NBZ7 420 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 OR52I1Q8NGK6 324 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RPLP0P6Q8NHW5 317 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SCARB1Q8WTV0 552 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 FCRL1Q96LA6 429 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 ACTR6Q9GZN1 396 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 RSPH9Q9H1X1 276 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 GPR34Q9UPC5 381 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 KCNK6Q9Y257 313 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 PLEKHM1Q9Y4G2 1056 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SERPIND1P05546 499 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 POU2F2P09086 479 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 IDSP22304 550 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 WNT4P56705 351 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 TAS2R50P59544 299 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 AGBL4Q5VU57 503 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 HSD17B13Q7Z5P4 300 aaPredicted RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 ADCK2Q7Z695 626 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 CBLN2Q8IUK8 224 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SIAH3Q8IW03 269 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 NAGSQ8N159 534 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 OR5AK3PQ8NH89 298 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 HDAC8Q9BY41 377 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SEMA4CQ9C0C4 833 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 XKR8Q9H6D3 395 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 BRF2Q9HAW0 419 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 NANSQ9NR45 359 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 TAS2R3Q9NYW6 316 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 MRPL15Q9P015 296 aaKnown RBP13.04□□□□□ -0.32
LIG1-203ENST00000536218 MGAT4CQ9UBM8 478 aa13.04□□□□□ -0.32
LIG1-203ENST00000536218 SPDEFO95238 335 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 CELP19835 753 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 NFYAP23511 347 aaPredicted RBP13.03□□□□□ -0.32
LIG1-203ENST00000536218 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
LIG1-203ENST00000536218 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms