RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ALDH3B2P48448 385 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CASP4P49662 377 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 AP3M2P53677 418 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MAGOHP61326 146 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 HNRNPKP61978 463 aaKnown RBP eCLIP2.95□□□□□ -1.94
USP48-215ENST00000534705 NTHL1P78549 312 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 IFITM2Q01629 132 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CYP24A1Q07973 514 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ELP6Q0PNE2 266 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TAF10Q12962 218 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SGCGQ13326 291 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PNOCQ13519 176 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TMEM132DQ14C87 1099 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 KRT31Q15323 416 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SGCBQ16585 318 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 KYAT1Q16773 422 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MAJINQ3KP22 176 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 UGT3A2Q3SY77 523 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PHLDA2Q53GA4 152 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ACSBG2Q5FVE4 666 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 SLC35D3Q5M8T2 416 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.95□□□□□ -1.94
USP48-215ENST00000534705 ATAD3BQ5T9A4 648 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CTRB2Q6GPI1 263 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 NIPAL1Q6NVV3 410 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 C8orf74Q6P047 294 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ZBTB49Q6ZSB9 765 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TMPRSS11BQ86T26 416 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 LACC1Q8IV20 430 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MMAAQ8IVH4 418 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 ZC3H3Q8IXZ2 948 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 ELMOD2Q8IZ81 293 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 GPD1LQ8N335 351 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 RIBC1Q8N443 379 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 LINC00469Q8N7U9 141 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 KBTBD8Q8NFY9 601 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 OR10T2Q8NGX3 314 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ZNF461Q8TAF7 563 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ACTRT1Q8TDG2 376 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 UBLCP1Q8WVY7 318 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 NELFBQ8WX92 580 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PEX13Q92968 403 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MAGOHBQ96A72 148 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 CFAP36Q96G28 342 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 BSCL2Q96G97 398 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 SENP8Q96LD8 212 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 NECTIN4Q96NY8 510 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 BTBD9Q96Q07 612 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 ECSITQ9BQ95 431 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 FAM213AQ9BRX8 229 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 URM1Q9BTM9 101 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 TBC1D10AQ9BXI6 508 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 CLEC7AQ9BXN2 247 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 WWTR1Q9GZV5 400 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 NSRP1Q9H0G5 558 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 NEUROG2Q9H2A3 272 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 FN3KQ9H479 309 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 NGBQ9NPG2 151 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 FAM207AQ9NSI2 230 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 CENPMQ9NSP4 180 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 DNAJC11Q9NVH1 559 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 GDAP2Q9NXN4 497 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 RBAKQ9NYW8 714 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 C6orf203Q9P0P8 240 aaPredicted RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 EPHA6Q9UF33 1036 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MUTYHQ9UIF7 546 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TRMT6Q9UJA5 497 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 GMEB2Q9UKD1 530 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TSPAN16Q9UKR8 245 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 KIAA1257Q9ULG3 409 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 GUCA1BQ9UMX6 200 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 TRAF3IP3Q9Y228 551 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 PADI2Q9Y2J8 665 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 MYLKQ15746 1914 aa2.95□□□□□ -1.94
USP48-215ENST00000534705 RIF1Q5UIP0 2472 aaKnown RBP2.95□□□□□ -1.94
USP48-215ENST00000534705 PTPRBP23467 1997 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 A0A1W2PQ67 120 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 ZSCAN5CA6NGD5 496 aaPredicted RBP2.94□□□□□ -1.94
USP48-215ENST00000534705 C5orf52A6NGY3 159 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 PCNX2A6NKB5 2137 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 C15orf61A6NNL5 157 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 A8MXQ7 604 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 KPNA7A9QM74 516 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 ANHXE9PGG2 379 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 SPECC1L-ADORA2AF8WAN1 911 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 E2F3O00716 465 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 PDXKO00764 312 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 CLDN4O14493 209 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 CCL16O15467 120 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 AQP9O43315 295 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 RAD51CO43502 376 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 NDUFA2O43678 99 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 MAGEC1O60732 1142 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 RAD51DO75771 328 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 PDE5AO76074 875 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 RHOBTB1O94844 696 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 NXPH2O95156 264 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 KLHL2O95198 593 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 PSMG1O95456 288 aa2.94□□□□□ -1.94
USP48-215ENST00000534705 DIRAS3O95661 229 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms